Community Evaluation of Glycoproteomics Informatics Solutions Reveals 
High-Performance Search Strategies of Serum N- and O-Glycopeptide Data

Kawahara, Rebeca; Chernykh, Anastasia; Alagesan, Kathirvel; Bern, Marshall; Cao, Weiqian; Chalkley, Robert J.; Cheng, Kai; Choo, Matthew S.; Edwards, Nathan; Goldman, Radoslav; Hoffmann, Marcus; Hu, Yingwei; Huang, Yifan; Kim, Jin Young; Kletter, Doron; Liquet-Weiland, Benoit; Liu, Mingqi; Mechref, Yehia; Meng, Bo; Neelamegham, Sriram; Nguyen-Khuong, Terry; Nilsson, Jonas; Pap, Adam; Park, Gun Wook; Parker, Benjamin L.; Pegg, Cassandra L.; Penninger, Josef M.; Phung, Toan K.; Pioch, Marcus; Rapp, Erdmann; Sakalli, Enes; Sanda, Miloslav; Schulz, Benjamin L.; Scott, Nichollas E.; Sofronov, Georgy; Stadlmann, Johannes; Vakhrushev, Sergey Y.; Woo, Christina M.; Wu, Hung-Yi; Yang, Pengyuan; Ying, Wantao; Zhang, Hui; Zhang, Yong; Zhao, Jingfu; Zaia, Joseph; Haslam, Stuart M.; Palmisano, Giuseppe; Yoo, Jong Shin; Larson, Göran; Khoo, Kai-Hooi; Medzihradszky , Katalin F.; Kolarich, Daniel; Packer, Nicolle H.; Thaysen-Andersen, Morten

doi:10.1101/2021.03.14.435332

Lokale TagsFreigabegeschichteDetailsÜbersicht

Community Evaluation of Glycoproteomics Informatics Solutions Reveals High-Performance Search Strategies of Serum N- and O-Glycopeptide Data

Kawahara, R., Chernykh, A., Alagesan, K., Bern, M., Cao, W., Chalkley, R. J., et al. (2021). Community Evaluation of Glycoproteomics Informatics Solutions Reveals High-Performance Search Strategies of Serum N- and O-Glycopeptide Data. bioRxiv. doi:10.1101/2021.03.14.435332.

Item is Freigegeben

einblenden: alle ausblenden: alle

Basisdaten

einblenden: ausblenden:

Datensatz-Permalink: https://hdl.handle.net/21.11116/0000-0009-D1FC-F Versions-Permalink: https://hdl.handle.net/21.11116/0000-000C-10E4-0

Genre: Preprint

ausblenden:

Urheber:
Kawahara, Rebeca¹, Autor
Chernykh, Anastasia¹, Autor
Alagesan, Kathirvel², Autor
Bern, Marshall³, Autor
Cao, Weiqian⁴, Autor
Chalkley, Robert J.⁵, Autor
Cheng, Kai⁶, Autor
Choo, Matthew S.⁷, Autor
Edwards, Nathan^{8, 9}, Autor
Goldman, Radoslav^{8, 9, 10}, Autor
Hoffmann, Marcus¹¹, Autor
Hu, Yingwei¹², Autor
Huang, Yifan¹³, Autor
Kim, Jin Young¹⁴, Autor
Kletter, Doron³, Autor
Liquet-Weiland, Benoit^{15, 16}, Autor
Liu, Mingqi⁴, Autor
Mechref, Yehia¹³, Autor
Meng, Bo¹⁷, Autor
Neelamegham, Sriram⁶, Autor
Nguyen-Khuong, Terry⁷, AutorNilsson, Jonas¹⁸, AutorPap, Adam^{19, 20}, AutorPark, Gun Wook¹⁴, AutorParker, Benjamin L.²¹, AutorPegg, Cassandra L.²², AutorPenninger, Josef M.^{23, 24}, AutorPhung, Toan K.²², AutorPioch, Marcus¹¹, Autor Rapp, Erdmann^{11, 25}, Autor Sakalli, Enes²³, AutorSanda, Miloslav^{8, 10}, AutorSchulz, Benjamin L.²², AutorScott, Nichollas E.²⁶, AutorSofronov, Georgy¹⁵, AutorStadlmann, Johannes²³, AutorVakhrushev, Sergey Y.²⁷, AutorWoo, Christina M.²⁸, AutorWu, Hung-Yi²⁸, AutorYang, Pengyuan⁴, AutorYing, Wantao¹⁷, AutorZhang, Hui¹², AutorZhang, Yong¹⁷, AutorZhao, Jingfu¹³, AutorZaia, Joseph²⁹, AutorHaslam, Stuart M.³⁰, AutorPalmisano, Giuseppe³¹, AutorYoo, Jong Shin^{14, 32}, AutorLarson, Göran³³, AutorKhoo, Kai-Hooi³⁴, AutorMedzihradszky , Katalin F.^{5, 19}, AutorKolarich, Daniel², AutorPacker, Nicolle H.^{1, 2, 35}, AutorThaysen-Andersen, Morten^{1, 35}, Autor mehr..

Affiliations:
1Department of Molecular Sciences, Macquarie University, Sydney, NSW, Australia, ou_persistent22
2Institute for Glycomics, Griffith University Gold Coast Campus, QLD, Australia, ou_persistent22
3Protein Metrics Inc., Cupertino, CA, United States of America, ou_persistent22
4Institutes of Biomedical Sciences, and the NHC Key Laboratory of Glycoconjugates Research, Fudan University, Shanghai, China, ou_persistent22
5UCSF, School of Pharmacy, Department of Pharmaceutical Chemistry, San Francisco, CA, United States of America, ou_persistent22
6State University of New York, Buffalo, NY, United States of America, ou_persistent22
7Analytics Group, Bioprocessing Technology Institute, Agency for Science, Technology and Research, Singapore, ou_persistent22
8Clinical and Translational Glycoscience Research Center (CTGRC), Georgetown University, Washington, DC, United States of America, ou_persistent22
9Department of Biochemistry and Molecular & Cellular Biology, Georgetown University, Washington, DC, United States of America, ou_persistent22
10Department of Oncology, Georgetown University, Washington, DC, United States of America, ou_persistent22
11Bioprocess Engineering, Max Planck Institute for Dynamics of Complex Technical Systems, Max Planck Society, ou_1738140
12Department of Pathology, The Johns Hopkins University, Baltimore, MD, United States of America, ou_persistent22
13Department of Chemistry and Biochemistry, Texas Tech University, TX, United States of America, ou_persistent22
14Research Center of Bioconvergence Analysis, Korea Basic Science Institute, Republic of Korea, ou_persistent22
15Department of Mathematics and Statistics, Macquarie University, Sydney, NSW, Australia, ou_persistent22
16CNRS, Laboratoire de Mathématiques et de leurs Applications de PAU, E2S-UPPA, Pau, France, ou_persistent22
17State Key Laboratory of Proteomics, Beijing Institute of Lifeomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing), Beijing, China, ou_persistent22
18Proteomics Core Facility, Sahlgrenska academy, University of Gothenburg, Gothenburg, Sweden, ou_persistent22
19BRC, Laboratory of Proteomics Research, Szeged, Hungary, ou_persistent22
20Doctoral School in Biology, Faculty of Science and Informatics, University of Szeged, Szeged, Hungary, ou_persistent22
21Department of Anatomy and Physiology, University of Melbourne, Melbourne, VIC, Australia, ou_persistent22
22School of Chemistry and Molecular Biosciences, University of Queensland, QLD, Australia, ou_persistent22
23IMBA, Institute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna, Austria, ou_persistent22
24Department of Medical Genetics, Life Sciences Institute, University of British Columbia, Vancouver, BC, Canada, ou_persistent22
25glyXera GmbH, Magdeburg, Germany, ou_persistent22
26Deparment of Microbiology and Immunology, University of Melbourne, Melbourne, VIC, Australia, ou_persistent22
27Copenhagen Center for Glycomics, Department of Cellular and Molecular Medicine, University of Copenhagen, Copenhagen, Denmark, ou_persistent22
28Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, United States of America, ou_persistent22
29Department of Biochemistry, Boston University Medical Campus, Boston, MA, United States of America, ou_persistent22
30Department of Life Sciences, Imperial College London, London, UK, ou_persistent22
31Instituto de Ciências Biomédicas, Departamento de Parasitologia, Universidade de São Paulo, São Paulo, SP, Brazil, ou_persistent22
32Graduate School of Analytical Science and Technology, Chungnam National University, Daejeon, Republic of Korea, ou_persistent22
33Department of Laboratory Medicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden, ou_persistent22
34Institute of Biological Chemistry, Academia Sinica, Taipei, Taiwan, ou_persistent22
35Biomolecular Discovery Research Centre, Macquarie University, Sydney, NSW, Australia, ou_persistent22