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  Objective comparison of methods to decode anomalous diffusion

Munoz-Gil, G., Volpe, G., Garcia-March, M. A., Aghion, E., Argun, A., Hong, C. B., et al. (2021). Objective comparison of methods to decode anomalous diffusion. Nature Communications, 12(1): 6253. doi:10.1038/s41467-021-26320-w.

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Munoz-Gil, Gorka1, Autor
Volpe, Giovanni1, Autor
Garcia-March, Miguel Angel1, Autor
Aghion, Erez2, Autor           
Argun, Aykut1, Autor
Hong, Chang Beom1, Autor
Bland, Tom1, Autor
Bo, Stefano2, Autor           
Conejero, J. Alberto1, Autor
Firbas, Nicolas1, Autor
Orts, Oscar1, Autor
Gentili, Alessia1, Autor
Huang, Zihan1, Autor
Jeon, Jae-Hyung1, Autor
Kabbech, Helene1, Autor
Kim, Yeongjin1, Autor
Kowalek, Patrycja1, Autor
Krapf, Diego1, Autor
Loch-Olszewska, Hanna1, Autor
Lomholt, Michael A.1, Autor
Masson, Jean-Baptiste1, AutorMeyer, Philipp G.2, Autor           Park, Seongyu1, AutorRequena, Borja1, AutorSmal, Ihor1, AutorSong, Taegeun1, AutorSzwabinski, Janusz1, AutorThapa, Samudrajit1, AutorVerdier, Hippolyte1, AutorVolpe, Giorgio1, AutorWidera, Artur1, AutorLewenstein, Maciej1, AutorMetzler, Ralf1, AutorManzo, Carlo1, Autor mehr..
Affiliations:
1external, ou_persistent22              
2Max Planck Institute for the Physics of Complex Systems, Max Planck Society, ou_2117288              

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 MPIPKS: Stochastic processes
 Zusammenfassung: Deviations from Brownian motion leading to anomalous diffusion are found in transport dynamics from quantum physics to life sciences. The characterization of anomalous diffusion from the measurement of an individual trajectory is a challenging task, which traditionally relies on calculating the trajectory mean squared displacement. However, this approach breaks down for cases of practical interest, e.g., short or noisy trajectories, heterogeneous behaviour, or non-ergodic processes. Recently, several new approaches have been proposed, mostly building on the ongoing machine-learning revolution. To perform an objective comparison of methods, we gathered the community and organized an open competition, the Anomalous Diffusion challenge (AnDi). Participating teams applied their algorithms to a commonly-defined dataset including diverse conditions. Although no single method performed best across all scenarios, machine-learning-based approaches achieved superior performance for all tasks. The discussion of the challenge results provides practical advice for users and a benchmark for developers.
Deviations from Brownian motion leading to anomalous diffusion are ubiquitously found in transport dynamics but often difficult to characterize. Here the authors compare approaches for single trajectory analysis through an open competition, showing that machine learning methods outperform classical approaches.

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 Datum: 2021-10-292021-10-29
 Publikationsstatus: Erschienen
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 Identifikatoren: ISI: 000712910500024
DOI: 10.1038/s41467-021-26320-w
arXiv: 2105.06766
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Titel: Nature Communications
  Kurztitel : Nat. Commun.
Genre der Quelle: Zeitschrift
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Ort, Verlag, Ausgabe: London : Nature Publishing Group
Seiten: - Band / Heft: 12 (1) Artikelnummer: 6253 Start- / Endseite: - Identifikator: ISSN: 2041-1723
CoNE: https://pure.mpg.de/cone/journals/resource/2041-1723