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  Rearrangement of a unique Kv1.3 selectivity filter conformation upon binding of a drug

Tyagi, A., Ahmed, T., Jian, S., Bajaj, S., Ong, S. T., Goay, S. S. M., et al. (2022). Rearrangement of a unique Kv1.3 selectivity filter conformation upon binding of a drug. Proceedings of the National Academy of Sciences of the United States of America, 119(5): e2113536119. doi:10.1073/pnas.2113536119.

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 Creators:
Tyagi, Anu1, Author
Ahmed, Tofayel2, Author           
Jian, Shi3, Author
Bajaj, Saumya1, 4, Author
Ong, Seow Theng4, Author
Goay, Stephanie Shee Min4, Author
Zhao, Yue5, Author
Vorobyov, Igor6, 7, Author
Tian, Changlin5, Author
Chandy, K. George4, Author
Bhushan, Shashi1, 8, Author
Affiliations:
1School of Biological Sciences, Nanyang Technological University, Singapore, ou_persistent22              
2Department of Structural Biology, Max Planck Institute of Biophysics, Max Planck Society, ou_2068291              
3Department of Biological Sciences, National University of Singapore, Singapore, ou_persistent22              
4LKCMedicine-ICESing Ion Channel Platform, Lee Kong Chian School of Medicine, Nanyang Technological University Singapore, Singapore, ou_persistent22              
5Hefei National Laboratory of Physical Sciences at Microscale and School of Life Sciences, University of Science and Technology of China, Hefei, China, ou_persistent22              
6Department of Physiology and Membrane Biology, University of California, Davis, CA, ou_persistent22              
7Department of Pharmacology, University of California, Davis, CA , ou_persistent22              
8Nanyang Institute of Structural Biology, Nanyang Technological University, Singapore, ou_persistent22              

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Free keywords: dalazatide, ion channels, potassium channels, selectivity filter, ShK
 Abstract: We report two structures of the human voltage-gated potassium channel (Kv) Kv1.3 in immune cells alone (apo-Kv1.3) and bound to an immunomodulatory drug called dalazatide (dalazatide-Kv1.3). Both the apo-Kv1.3 and dalazatide-Kv1.3 structures are in an activated state based on their depolarized voltage sensor and open inner gate. In apo-Kv1.3, the aromatic residue in the signature sequence (Y447) adopts a position that diverges 11 Å from other K+ channels. The outer pore is significantly rearranged, causing widening of the selectivity filter and perturbation of ion binding within the filter. This conformation is stabilized by a network of intrasubunit hydrogen bonds. In dalazatide-Kv1.3, binding of dalazatide to the channel's outer vestibule narrows the selectivity filter, Y447 occupies a position seen in other K+ channels, and this conformation is stabilized by a network of intersubunit hydrogen bonds. These remarkable rearrangements in the selectivity filter underlie Kv1.3's transition into the drug-blocked state.

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Language(s): eng - English
 Dates: 2021-07-222021-12-202022-01-28
 Publication Status: Published online
 Pages: 10
 Publishing info: -
 Table of Contents: -
 Rev. Type: Peer
 Identifiers: DOI: 10.1073/pnas.2113536119
BibTex Citekey: tyagi_rearrangement_2022
 Degree: -

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Title: Proceedings of the National Academy of Sciences of the United States of America
  Other : PNAS
  Other : Proceedings of the National Academy of Sciences of the USA
  Abbreviation : Proc. Natl. Acad. Sci. U. S. A.
Source Genre: Journal
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Publ. Info: Washington, D.C. : National Academy of Sciences
Pages: - Volume / Issue: 119 (5) Sequence Number: e2113536119 Start / End Page: - Identifier: ISSN: 0027-8424
CoNE: https://pure.mpg.de/cone/journals/resource/954925427230