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  Haplotagging: haplotype phasing and single-tube combinatorial barcoding of nucleic acid molecules using bead-immobilized Tn5 transposase

Chan, Y., Dreau, A., & Kucka, M.(2021). Haplotagging: haplotype phasing and single-tube combinatorial barcoding of nucleic acid molecules using bead-immobilized Tn5 transposase.

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 Creators:
Chan, YF1, Author           
Dreau, A2, Author           
Kucka, M1, Author           
Affiliations:
1Chan Group, Friedrich Miescher Laboratory, Max Planck Society, ou_3008688              
2Jones Group, Friedrich Miescher Laboratory, Max Planck Society, Max-Planck-Ring 9, 72076 Tübingen, DE, ou_3008689              

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 Abstract: The present invention relates to methods for producing solid supports. The present invention further provides a mixture of said solid supports for tagmentation of target DNA for DNA sequencing approaches, a corresponding kit comprising the same and methods employing said mixture of solid supports and/or kit. Specifically, methods for producing sequencing libraries and corresponding DNA sequencing methods for analyzing the generated sequencing libraries and tools used therein are provided. In particular, DNA sequencing approaches allowing preservation of contiguity information of long DN A fragments even when using short read sequencing approaches are disclosed. A key concept of the present invention is to employ segmented barcodes, with every barcode segmented allowing for barcode error detection and correction on a segment level. Preferred barcode sequences employed are characterized in that they comprise no linker sequences or only linker sequences of one or two nucleotides in length between the barcode segments.

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 Dates: 2020-02-142021-08-05
 Publication Status: Published online
 Pages: -
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 Rev. Type: -
 Identifiers: Patent Nr.: AU2020220461A1
Patent Nr.: EP3924504A1
Patent Nr.: WO2020165433A1
Patent Nr.: CA3128098A1
 Degree: -

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