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  From the feces to the genome: a guideline for the isolation and preservation of Strongyloides stercoralis in the field for genetic and genomic analysis of individual worms

Zhou, S., Harbecke, D., & Streit, A. (2019). From the feces to the genome: a guideline for the isolation and preservation of Strongyloides stercoralis in the field for genetic and genomic analysis of individual worms. Parasites & Vectors, 12:. doi:10.1186/s13071-019-3748-5.

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アイテムのパーマリンク: https://hdl.handle.net/21.11116/0000-000A-64D2-8 版のパーマリンク: https://hdl.handle.net/21.11116/0000-000E-7771-D
資料種別: 学術論文

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 作成者:
Zhou, S, 著者
Harbecke, D, 著者
Streit, A1, 2, 著者           
所属:
1Department Integrative Evolutionary Biology, Max Planck Institute for Developmental Biology, Max Planck Society, ou_3375786              
2Parasitic Nematode Group, Department Integrative Evolutionary Biology, Max Planck Institute for Developmental Biology, Max Planck Society, ou_3507711              

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 要旨: Strongyloidiasis is a soil-borne helminthiasis, which, in spite of the up to 370 million people currently estimated to be infected with its causing agent, the nematode Strongyloides stercoralis, is frequently overlooked. Recent molecular taxonomic studies conducted in Southeast Asia and Australia, showed that dogs can carry the same genotypes of S. stercoralis that also infect humans, in addition to a presumably dog-specific Strongyloides species. This suggests a potential for zoonotic transmission of S. stercoralis from dogs to humans. Although natural S. stercoralis infections have not been reported in any host other than humans, non-human primates and dogs, other as yet unidentified animal reservoirs cannot be excluded. Molecular studies also showed that humans carry rather different genotypes of S. stercoralis. As a result, their taxonomic status and the question of whether they differ in their pathogenic potential remains open. It would therefore be very important to obtain molecular genetic/genomic information about S. stercoralis populations from around the world. One way of achieving this (with little additional sampling effort) would be that people encountering S. stercoralis in the process of their diagnostic work preserve some specimens for molecular analysis. Here we provide a guideline for the isolation, preservation, genotyping at the nuclear 18S rDNA and the mitochondrial cox1 loci, and for whole genome sequencing of single S. stercoralis worms. Since in many cases the full analysis is not possible or desired at the place and time where S. stercoralis are found, we emphasize when and how samples can be preserved, stored and shipped for later analysis. We hope this will benefit and encourage researchers conducting field studies or diagnostics to collect and preserve S. stercoralis for molecular genetic/genomic analyses and either analyze them themselves or make them available to others for further analysis.

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 日付: 2019-10
 出版の状態: 出版
 ページ: -
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 識別子(DOI, ISBNなど): DOI: 10.1186/s13071-019-3748-5
PMID: 31640777
 学位: -

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出版物 1

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出版物名: Parasites & Vectors
種別: 学術雑誌
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出版社, 出版地: London : BioMed Central
ページ: 11 巻号: 12 通巻号: 496 開始・終了ページ: - 識別子(ISBN, ISSN, DOIなど): ISSN: 1756-3305
CoNE: https://pure.mpg.de/cone/journals/resource/1756-3305