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  A Species-Wide Inventory of NLR Genes and Alleles in Arabidopsis thaliana

Van de Weyer, A.-L., Monteiro, F., Furzer, O., Nishimura, M., Cevik, V., Witek, K., et al. (2019). A Species-Wide Inventory of NLR Genes and Alleles in Arabidopsis thaliana. Cell, 178(5), 1260-1272. doi:10.1016/j.cell.2019.07.038.

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Genre: Zeitschriftenartikel

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Van de Weyer, A-L1, Autor           
Monteiro, F, Autor
Furzer, OJ, Autor
Nishimura, MT, Autor
Cevik, V, Autor
Witek, K, Autor
Jones, JDG, Autor
Dangl, JL, Autor
Weigel, D1, Autor           
Bemm, F1, Autor           
Affiliations:
1Department Molecular Biology, Max Planck Institute for Developmental Biology, Max Planck Society, ou_3375790              

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 Zusammenfassung: Infectious disease is both a major force of selection in nature and a prime cause of yield loss in agriculture. In plants, disease resistance is often conferred by nucleotide-binding leucine-rich repeat (NLR) proteins, intracellular immune receptors that recognize pathogen proteins and their effects on the host. Consistent with extensive balancing and positive selection, NLRs are encoded by one of the most variable gene families in plants, but the true extent of intraspecific NLR diversity has been unclear. Here, we define a nearly complete species-wide pan-NLRome in Arabidopsis thaliana based on sequence enrichment and long-read sequencing. The pan-NLRome largely saturates with approximately 40 well-chosen wild strains, with half of the pan-NLRome being present in most accessions. We chart NLR architectural diversity, identify new architectures, and quantify selective forces that act on specific NLRs and NLR domains. Our study provides a blueprint for defining pan-NLRomes.

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 Datum: 2019-08
 Publikationsstatus: Erschienen
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 Ort, Verlag, Ausgabe: -
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 Art der Begutachtung: -
 Identifikatoren: DOI: 10.1016/j.cell.2019.07.038
PMID: 31442410
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Titel: Cell
Genre der Quelle: Zeitschrift
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Ort, Verlag, Ausgabe: Cambridge, Mass. : Cell Press
Seiten: - Band / Heft: 178 (5) Artikelnummer: - Start- / Endseite: 1260 - 1272 Identifikator: ISSN: 0092-8674
CoNE: https://pure.mpg.de/cone/journals/resource/954925463183