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  Fine-scale metabolic discontinuity in a stratified prokaryote microbiome of a Red Sea deep halocline

Michoud, G., Ngugi, D. K., Barozzi, A., Merlino, G., Calleja, M. L., Delgado-Huertas, A., et al. (2021). Fine-scale metabolic discontinuity in a stratified prokaryote microbiome of a Red Sea deep halocline. The ISME Journal, 15, 2351-2365. doi:10.1038/s41396-021-00931-z.

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 Creators:
Michoud, Grégoire, Author
Ngugi, David Kamanda, Author
Barozzi, Alan, Author
Merlino, Giuseppe, Author
Calleja, Maria Ll.1, Author           
Delgado-Huertas, Antonio, Author
Morán, Xosé Anxelu G., Author
Daffonchio, Daniele, Author
Affiliations:
1Climate Geochemistry, Max Planck Institute for Chemistry, Max Planck Society, ou_2237635              

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 Abstract: Deep-sea hypersaline anoxic basins are polyextreme environments in the ocean’s interior characterized by the high density of brines that prevents mixing with the overlaying seawater, generating sharp chemoclines and redoxclines up to tens of meters thick that host a high concentration of microbial communities. Yet, a fundamental understanding of how such pycnoclines shape microbial life and the associated biogeochemical processes at a fine scale, remains elusive. Here, we applied high-precision sampling of the brine–seawater transition interface in the Suakin Deep, located at 2770 m in the central Red Sea, to reveal previously undocumented fine-scale community structuring and succession of metabolic groups along a salinity gradient only 1 m thick. Metagenomic profiling at a 10-cm-scale resolution highlighted spatial organization of key metabolic pathways and corresponding microbial functional units, emphasizing the prominent role and significance of salinity and oxygen in shaping their ecology. Nitrogen cycling processes are especially affected by the redoxcline with ammonia oxidation processes being taxa and layers specific, highlighting also the presence of novel microorganisms, such as novel Thaumarchaeota and anammox, adapted to the changing conditions of the chemocline. The findings render the transition zone as a critical niche for nitrogen cycling, with complementary metabolic networks, in turn underscoring the biogeochemical complexity of deep-sea brines.

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Language(s): eng - English
 Dates: 2021-03-01
 Publication Status: Published online
 Pages: -
 Publishing info: -
 Table of Contents: -
 Rev. Type: Peer
 Identifiers: DOI: 10.1038/s41396-021-00931-z
 Degree: -

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Title: The ISME Journal
  Abbreviation : ISME J
  Other : The ISME journal : multidisciplinary journal of microbial ecology
Source Genre: Journal
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Publ. Info: Basingstoke : Nature Publishing Group
Pages: - Volume / Issue: 15 Sequence Number: - Start / End Page: 2351 - 2365 Identifier: ISSN: 1751-7370
CoNE: https://pure.mpg.de/cone/journals/resource/1751-7370