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  Millisecond cryo-trapping by the spitrobot crystal plunger simplifies time-resolved crystallography

Mehrabi, P., Sung, S., von Stetten, D., Prester, A., Hatton, C. E., Kleine-Döpke, S., et al. (2023). Millisecond cryo-trapping by the spitrobot crystal plunger simplifies time-resolved crystallography. Nature Communications, 14(1): 2365. doi:10.1038/s41467-023-37834-w.

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 Creators:
Mehrabi, P.1, 2, Author           
Sung, S.3, Author
von Stetten, D.3, Author
Prester, A.4, Author
Hatton, C. E.1, Author
Kleine-Döpke, S.1, Author
Berkes, A.1, Author
Gore, G.1, Author
Leimkohl, J.-P.5, Author           
Schikora, H.5, Author           
Kollewe, M.5, Author           
Rohde, H.4, Author
Wilmanns, M.3, 4, Author
Tellkamp, F.5, Author           
Schulz, E.-C.1, 2, 4, Author           
Affiliations:
1Institute for Nanostructure and Solid State Physics, Universität Hamburg, ou_persistent22              
2Miller Group, Atomically Resolved Dynamics Department, Max Planck Institute for the Structure and Dynamics of Matter, Max Planck Society, ou_1938288              
3European Molecular Biology Laboratory, Hamburg Unit, ou_persistent22              
4University Medical Center Hamburg-Eppendorf (UKE), ou_persistent22              
5Machine Physics, Scientific Service Units, Max Planck Institute for the Structure and Dynamics of Matter, Max Planck Society, ou_2074322              

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 Abstract: We introduce the spitrobot, a protein crystal plunger, enabling reaction quenching via cryo-trapping with a time-resolution in the millisecond range. Protein crystals are mounted on canonical micromeshes on an electropneumatic piston, where the crystals are kept in a humidity and temperature-controlled environment, then reactions are initiated via the liquid application method (LAMA) and plunging into liquid nitrogen is initiated after an electronically set delay time to cryo-trap intermediate states. High-magnification images are automatically recorded before and after droplet deposition, prior to plunging. The SPINE-standard sample holder is directly plunged into a storage puck, enabling compatibility with high-throughput infrastructure. Here we demonstrate binding of glucose and 2,3-butanediol in microcrystals of xylose isomerase, and of avibactam and ampicillin in microcrystals of the extended spectrum beta-lactamase CTX-M-14. We also trap reaction intermediates and conformational changes in macroscopic crystals of tryptophan synthase to demonstrate that the spitrobot enables insight into catalytic events.

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Language(s): eng - English
 Dates: 2022-11-102023-04-012023-04-25
 Publication Status: Published online
 Pages: -
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 Rev. Type: Peer
 Identifiers: DOI: 10.1038/s41467-023-37834-w
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Project name : Data were collected at beamlines P13 and P14 operated by EMBL Hamburg at the PETRA III storage ring (DESY, Hamburg, Germany). We would like to thank our colleagues A.R. Pearson and G. Bourenkov for helpful discussions and critical reading of the manuscript. The authors gratefully acknowledge the support provided by the Max-Planck Society. P.M. acknowledges support from the Deutsche Forschungsgemeinschaft (DFG) via grant No. 451079909 and from a Joachim Herz Stiftung add-on fellowship. E.C.S. acknowledges support by the DFG via grant No. 458246365, and by the Federal Ministry of Education and Research, Germany, under grant number 01KI2114. E.C.S., H.R., and A.P. acknowledge support from the Joachim Herz Stiftung via the Biomedical Physics of Infection Consortium. S.S. was supported by a fellowship from the EMBL Interdisciplinary Postdoc (EIPOD) program under Marie Sklodowska-Curie Actions COFUND (grant agreement number 664726).
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Title: Nature Communications
  Abbreviation : Nat. Commun.
Source Genre: Journal
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Publ. Info: London : Nature Publishing Group
Pages: - Volume / Issue: 14 (1) Sequence Number: 2365 Start / End Page: - Identifier: ISSN: 2041-1723
CoNE: https://pure.mpg.de/cone/journals/resource/2041-1723