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  Genome sequencing reveals evidence of adaptive variation in the genus Zea

Chen, L., Luo, J., Jin, M., Yang, N., Liu, X., Peng, Y., et al. (2022). Genome sequencing reveals evidence of adaptive variation in the genus Zea. Nature Genetics, 54, 1736-1745. doi:10.1038/s41588-022-01184-y.

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Chen, Lu1, Autor
Luo, Jingyun1, Autor
Jin, Minliang1, Autor
Yang, Ning1, Autor
Liu, Xiangguo1, Autor
Peng, Yong1, Autor
Li, Wenqiang1, Autor
Phillips, Alyssa1, Autor
Cameron, Brenda1, Autor
Bernal, Julio S.1, Autor
Rellán-Álvarez, Rubén1, Autor
Sawers, Ruairidh J. H.1, Autor
Liu, Qing1, Autor
Yin, Yuejia1, Autor
Ye, Xinnan1, Autor
Yan, Jiali1, Autor
Zhang, Qinghua1, Autor
Zhang, Xiaoting1, Autor
Wu, Shenshen1, Autor
Gui, Songtao1, Autor
Wei, Wenjie1, AutorWang, Yuebin1, AutorLuo, Yun1, AutorJiang, Chenglin1, AutorDeng, Min1, AutorJin, Min1, AutorJian, Liumei1, AutorYu, Yanhui1, AutorZhang, Maolin1, AutorYang, Xiaohong1, AutorHufford, Matthew B.1, AutorFernie, A. R.2, Autor           Warburton, Marilyn L.1, AutorRoss-Ibarra, Jeffrey1, AutorYan, Jianbing1, Autor mehr..
Affiliations:
1external, ou_persistent22              
2Central Metabolism, Department Gutjahr, Max Planck Institute of Molecular Plant Physiology, Max Planck Society, ou_3396323              

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 Zusammenfassung: Maize is a globally valuable commodity and one of the most extensively studied genetic model organisms. However, we know surprisingly little about the extent and potential utility of the genetic variation found in wild relatives of maize. Here, we characterize a high-density genomic variation map from 744 genomes encompassing maize and all wild taxa of the genus Zea, identifying over 70 million single-nucleotide polymorphisms. The variation map reveals evidence of selection within taxa displaying novel adaptations. We focus on adaptive alleles in highland teosinte and temperate maize, highlighting the key role of flowering-time-related pathways in their adaptation. To show the utility of variants in these data, we generate mutant alleles for two flowering-time candidate genes. This work provides an extensive sampling of the genetic diversity of Zea, resolving questions on evolution and identifying adaptive variants for direct use in modern breeding.

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Sprache(n): eng - English
 Datum: 2022-10-202022-10
 Publikationsstatus: Erschienen
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 Ort, Verlag, Ausgabe: -
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 Identifikatoren: DOI: 10.1038/s41588-022-01184-y
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Titel: Nature Genetics
  Andere : Nature Genet.
Genre der Quelle: Zeitschrift
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Ort, Verlag, Ausgabe: New York, NY : Nature America, Inc.
Seiten: - Band / Heft: 54 Artikelnummer: - Start- / Endseite: 1736 - 1745 Identifikator: ISSN: 1061-4036
CoNE: https://pure.mpg.de/cone/journals/resource/954925598609