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  Genome-wide dFOXO targets and topology of the transcriptomic response to stress and insulin signalling

Alic, N., Andrews, T. D., Giannakou, M. E., Papatheodorou, I., Slack, C., Hoddinott, M. P., et al. (2011). Genome-wide dFOXO targets and topology of the transcriptomic response to stress and insulin signalling. Mol Syst Biol, 7, 502. doi:msb201136 [pii] 10.1038/msb.2011.36.

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 Creators:
Alic, N., Author
Andrews, T. D., Author
Giannakou, M. E., Author
Papatheodorou, I., Author
Slack, C., Author
Hoddinott, M. P., Author
Cocheme, H. M., Author
Schuster, E. F., Author
Thornton, J. M., Author
Partridge, L.1, Author           
Affiliations:
1Department Partridge - Biological Mechanisms of Ageing, Max Planck Institute for Biology of Ageing, Max Planck Society, ou_1942287              

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Free keywords: Animals Caenorhabditis elegans/genetics/metabolism Down-Regulation Drosophila/genetics/metabolism Drosophila Proteins/genetics/*metabolism Female Forkhead Transcription Factors/genetics/*metabolism GATA Transcription Factors/metabolism Gene Expression Profiling/*methods Genome, Insect Insulin/*metabolism Oxidative Stress Phenotype Signal Transduction Somatomedins/metabolism Up-Regulation
 Abstract: FoxO transcription factors, inhibited by insulin/insulin-like growth factor signalling (IIS), are crucial players in numerous organismal processes including lifespan. Using genomic tools, we uncover over 700 direct dFOXO targets in adult female Drosophila. dFOXO is directly required for transcription of several IIS components and interacting pathways, such as TOR, in the wild-type fly. The genomic locations occupied by dFOXO in adults are different from those observed in larvae or cultured cells. These locations remain unchanged upon activation by stresses or reduced IIS, but the binding is increased and additional targets activated upon genetic reduction in IIS. We identify the part of the IIS transcriptional response directly controlled by dFOXO and the indirect effects and show that parts of the transcriptional response to IIS reduction do not require dfoxo. Promoter analyses revealed GATA and other forkhead factors as candidate mediators of the indirect and dfoxo-independent effects. We demonstrate genome-wide evolutionary conservation of dFOXO targets between the fly and the worm Caenorhabditis elegans, enriched for a second tier of regulators including the dHR96/daf-12 nuclear hormone receptor.

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Language(s): eng - English
 Dates: 2011
 Publication Status: Issued
 Pages: -
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 Rev. Type: -
 Identifiers: DOI: msb201136 [pii] 10.1038/msb.2011.36
ISSN: 1744-4292 (Electronic) 1744-4292 (Linking)
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Title: Mol Syst Biol
Source Genre: Journal
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Pages: - Volume / Issue: 7 Sequence Number: - Start / End Page: 502 Identifier: -