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  Molecular interactions of FG nucleoporin repeats at high resolution

de Opakua, A. I., Geraets, J. A., Frieg, B., Dienemann, C., Savastano, A., Rankovic, M., et al. (2022). Molecular interactions of FG nucleoporin repeats at high resolution. Nature Chemistry, 14, 1278-1285. doi:10.1038/s41557-022-01035-7.

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de Opakua, Alain Ibáñez, Author
Geraets, James A., Author
Frieg, Benedikt, Author
Dienemann, Christian1, Author           
Savastano, Adriana, Author
Rankovic, Marija2, Author           
Cima-Omori, Maria-Sol, Author
Schröder, Gunnar F., Author
Zweckstetter, M.2, Author           
Affiliations:
1Department of Molecular Biology, Max Planck Institute for Multidisciplinary Sciences, Max Planck Society, ou_3350224              
2Department of NMR Based Structural Biology, Max Planck Institute for Multidisciplinary Sciences, Max Planck Society, ou_3350124              

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 Abstract: Proteins that contain repeat phenylalanine-glycine (FG) residues phase separate into oncogenic transcription factor condensates in malignant leukaemias, form the permeability barrier of the nuclear pore complex and mislocalize in neurodegenerative diseases. Insights into the molecular interactions of FG-repeat nucleoporins have, however, remained largely elusive. Using a combination of NMR spectroscopy and cryoelectron microscopy, we have identified uniformly spaced segments of transient β-structure and a stable preformed α-helix recognized by messenger RNA export factors in the FG-repeat domain of human nucleoporin 98 (Nup98). In addition, we have determined at high resolution the molecular organization of reversible FG–FG interactions in amyloid fibrils formed by a highly aggregation-prone segment in Nup98. We have further demonstrated that amyloid-like aggregates of the FG-repeat domain of Nup98 have low stability and are reversible. Our results provide critical insights into the molecular interactions underlying the self-association and phase separation of FG-repeat nucleoporins in physiological and pathological cell activities.

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Language(s): eng - English
 Dates: 2022-09-22
 Publication Status: Published online
 Pages: -
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 Table of Contents: -
 Rev. Type: Peer
 Identifiers: DOI: 10.1038/s41557-022-01035-7
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Project name : M.Z. was supported by the European Research Council (ERC) under the EU Horizon 2020 Research and Innovation Programme (grant agreement no. 787679). B.F., J.A.G. and G.F.S. are grateful for the computational support and infrastructure provided by the Zentrum für Informations und Medientechnologie (ZIM) at the Heinrich Heine University Düsseldorf and the computing time provided by Forschungszentrum Jülich on the supercomputer JURECA/JURECA-DC at the Jülich Supercomputing Centre (JSC).
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Funding program : -
Funding organization : -
Project name : LLPS-NMR
Grant ID : 787679
Funding program : Horizon 2020 (H2020)
Funding organization : European Commission (EC)

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Title: Nature Chemistry
  Abbreviation : Nat. Chem.
Source Genre: Journal
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Publ. Info: London, UK : Nature Publishing Group
Pages: - Volume / Issue: 14 Sequence Number: - Start / End Page: 1278 - 1285 Identifier: ISSN: 1755-4330
CoNE: https://pure.mpg.de/cone/journals/resource/1755-4330