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  Genome-Wide Copy Number Variant and High-Throughput Transcriptomics Analyses of Placental Tissues Underscore Persisting Child Susceptibility in At-Risk Pregnancies Cleared in Standard Genetic Testing

Czamara, D., Cruceanu, C., Lahti-Pulkkinen, M., Dieckmann, L., Koedel, M., Sauer, S., Rex-Haffner, M., Sammallahti, S., Kajantie, E., Laivuori, H., Lahti, J., Raikkonen, K., & Binder, E. B. (2022). Genome-Wide Copy Number Variant and High-Throughput Transcriptomics Analyses of Placental Tissues Underscore Persisting Child Susceptibility in At-Risk Pregnancies Cleared in Standard Genetic Testing. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 23(19):. doi:10.3390/ijms231911448.

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アイテムのパーマリンク: https://hdl.handle.net/21.11116/0000-000C-79E3-C 版のパーマリンク: https://hdl.handle.net/21.11116/0000-000C-CEFE-F
資料種別: 学術論文

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 作成者:
Czamara, Darina1, 著者           
Cruceanu, Cristiana1, 著者           
Lahti-Pulkkinen, Marius, 著者
Dieckmann, Linda1, 2, 著者           
Koedel, Maik1, 著者           
Sauer, Susann1, 著者           
Rex-Haffner, Monika1, 著者           
Sammallahti, Sara, 著者
Kajantie, Eero, 著者
Laivuori, Hannele, 著者
Lahti, Jari, 著者
Raikkonen, Katri, 著者
Binder, Elisabeth B.1, 著者           
所属:
1Dept. Genes and Environment, Max Planck Institute of Psychiatry, Max Planck Society, Kraepelinstr. 2-10, 80804 Munich, DE, ou_2035295              
2IMPRS Translational Psychiatry, Max Planck Institute of Psychiatry, Max Planck Society, ou_3318616              

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 要旨: Several studies have shown that children from pregnancies with estimated first-trimester risk based on fetal nuchal translucency thickness and abnormal maternal serum pregnancy protein and hormone levels maintain a higher likelihood of adverse outcomes, even if initial testing for known genetic conditions is negative. We used the Finnish InTraUterine cohort (ITU), which is a comprehensively characterized perinatal cohort consisting of 943 mothers and their babies followed throughout pregnancy and 18 months postnatally, including mothers shortlisted for prenatal genetic testing but cleared for major aneuploidies (cases: n = 544, 57.7%) and control pregnancies (n = 399, 42.3%). Using genome-wide genotyping and RNA sequencing of first-trimester and term placental tissue, combined with medical information from registry data and maternal self-report data, we investigated potential negative medical outcomes and genetic susceptibility to disease and their correlates in placenta gene expression. Case mothers did not present with higher levels of depression, perceived stress, or anxiety during pregnancy. Case children were significantly diagnosed more often with congenital malformations of the circulatory system (4.12 (95% CI [1.22-13.93]) higher hazard) and presented with significantly more copy number duplications as compared to controls (burden analysis, based on all copy number variants (CNVs) with at most 10% frequency, 823 called duplications in 297 cases versus 626 called duplications in 277 controls, p = 0.01). Fifteen genes showed differential gene expression (FDR < 0.1) in association with congenital malformations in first-trimester but not term placenta. These were significantly enriched for genes associated with placental dysfunction. In spite of normal routine follow-up prenatal testing results in early pregnancy, case children presented with an increased likelihood of negative outcomes, which should prompt vigilance in follow-up during pregnancy and after birth.

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 日付: 2022-10
 出版の状態: オンラインで出版済み
 ページ: -
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 目次: -
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 識別子(DOI, ISBNなど): ISI: 000867723100001
DOI: 10.3390/ijms231911448
 学位: -

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出版物 1

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出版物名: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
種別: 学術雑誌
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出版社, 出版地: -
ページ: - 巻号: 23 (19) 通巻号: 11448 開始・終了ページ: - 識別子(ISBN, ISSN, DOIなど): -