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  Advances in the study of ancient biomolecules in archaeological dental calculus

Fagernäs, Z. (2022). Advances in the study of ancient biomolecules in archaeological dental calculus. PhD Thesis, Friedrich Schiller University Jena, Faculty of Biosciences, Jena.

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Dissertation, Friedrich Schiller University Jena, 2022
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 Creators:
Fagernäs, Zandra1, Author           
Warinner, Christina G.1, Referee                 
Krause, Johannes1, Referee                 
Rascovan, Nicolás, Referee
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1Archaeogenetics, Max Planck Institute for the Science of Human History, Max Planck Society, ou_2074310              

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Free keywords: Archäogenetik Proteomanalyse Zahnstein Mikrobiom <Genetik>
 Abstract: Studies of ancient microbiomes can shed light on several aspects of human history and microbial evolution, as well as aid in understanding modern day diseases. During recent years, studies of archaeological dental calculus have gained much interest, as this calcified microbial biofilm preserves biomolecules over long periods of time, and can hold information about health, disease, diet, the human host, and occasionally even the living environment and occupational activities of an individual. However, continued advances in the research of dental calculus are essential, in order to make sure that this finite archaeological material is utilized in the best way possible. This thesis presents several such developments, beginning with a thorough review of formation and occurrence of archaeological dental calculus, as well as its past and current study, in order to set a basis for understanding the research into this topic. Thereafter, state-of-the-art archaeogenetic and palaeoproteomic methods are employed to advance the study of archaeological dental calculus at different stages in the research process, from project design and laboratory processing, to analysis and result interpretation. Taken together, the four manuscripts presented in the thesis push forward the development of the field of biomolecular research of archaeological dental calculus. They provide researchers with valuable information for study design and result interpretation, as well as introduce new types of analyses into the field.

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Language(s): eng - English
 Dates: 2021-09-232022-03-152022-03-152022-03-15
 Publication Status: Issued
 Pages: 167
 Publishing info: Jena : Friedrich Schiller University Jena, Faculty of Biosciences
 Table of Contents: Introduction
The human microbiome
Ancient microbes and microbiomes
Why study ancient microbiomes?
Challenges with studying ancient microbiomes
Preservation assessment and authentication
Method development
Checking our assumptions
Preserving archaeological materials
Interdisciplinary studies and their strengths
Aims and objectives
Overview of manuscripts
Manuscript A
Manuscript B
Manuscript C
Manuscript D
Discussion
The stability of the dental calculus microbiome
Seeing the trees in the forest
Limitations of archaeological dental calculus
The importance of study design
Future directions
Summary
Zusammenfassung
References
Eigenständigkeitserklärung
Acknowledgements
Appendix
Appendix A: Summary of author contributions
Appendix B. Supplementary information for Manuscript B
Appendix C: Supplementary information for Manuscript C
Appendix D: Supplementary information for Manuscript D
 Rev. Type: -
 Identifiers: URN: https://nbn-resolving.org/urn:nbn:de:gbv:27-dbt-20220428-101704-008
URN: https://www.db-thueringen.de/receive/dbt_mods_00051898
Other: shh3368
 Degree: PhD

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