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  Spatial proteomics in three-dimensional intact specimens

Bhatia, H. S., Brunner, A.-D., Oeztuerk, F., Kapoor, S., Rong, Z., Mai, H., et al. (2022). Spatial proteomics in three-dimensional intact specimens. Cell, 185(26), 5040-5058. doi:10.1016/j.cell.2022.11.021.

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Bhatia, Harsharan Singh1, Autor
Brunner, Andreas-David2, Autor           
Oeztuerk, Furkan1, Autor
Kapoor, Saketh1, Autor
Rong, Zhouyi1, Autor
Mai, Hongcheng1, Autor
Thielert, Marvin2, Autor           
Ali, Mayar1, Autor
Al-Maskari, Rami1, Autor
Paetzold, Johannes Christian1, Autor
Kofler, Florian1, Autor
Todorov, Mihail Ivilinov1, Autor
Molbay, Muge1, Autor
Kolabas, Zeynep Ilgin1, Autor
Negwer, Moritz1, Autor
Hoeher, Luciano1, Autor
Steinke, Hanno1, Autor
Dima, Alina1, Autor
Gupta, Basavdatta1, Autor
Kaltenecker, Doris1, Autor
Caliskan, Ozum Sehnaz1, AutorBrandt, Daniel1, AutorKrahmer, Natalie1, AutorMueller, Stephan1, AutorLichtenthaler, Stefan Frieder1, AutorHellal, Farida1, AutorBechmann, Ingo1, AutorMenze, Bjoern1, AutorTheis, Fabian1, AutorMann, Matthias2, Autor           Ertuerk, Ali1, Autor mehr..
Affiliations:
1external, ou_persistent22              
2Mann, Matthias / Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Max Planck Society, ou_1565159              

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Schlagwörter: ALZHEIMERS-DISEASE; GENE-EXPRESSION; MOUSE MODEL; A-BETA; BRAIN; NORMALIZATION; RESOLUTION; PLATFORM; COMPLEX; PLAQUESBiochemistry & Molecular Biology; Cell Biology;
 Zusammenfassung: Spatial molecular profiling of complex tissues is essential to investigate cellular function in physiological and pathological states. However, methods for molecular analysis of large biological specimens imaged in 3D are lacking. Here, we present DISCO-MS, a technology that combines whole-organ/wholeorganism clearing and imaging, deep-learning-based image analysis, robotic tissue extraction, and ultrahigh-sensitivity mass spectrometry. DISCO-MS yielded proteome data indistinguishable from uncleared samples in both rodent and human tissues. We used DISCO-MS to investigate microglia activation along axonal tracts after brain injury and characterized early-and late-stage individual amyloid-beta plaques in a mouse model of Alzheimer's disease. DISCO-bot robotic sample extraction enabled us to study the regional heterogeneity of immune cells in intact mouse bodies and aortic plaques in a complete human heart. DISCO-MS enables unbiased proteome analysis of preclinical and clinical tissues after unbiased imaging of entire specimens in 3D, identifying diagnostic and therapeutic opportunities for complex diseases.

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Sprache(n): eng - English
 Datum: 2022-12-122022-12-22
 Publikationsstatus: Erschienen
 Seiten: 39
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: ISI: 000910983000001
DOI: 10.1016/j.cell.2022.11.021
 Art des Abschluß: -

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Titel: Cell
Genre der Quelle: Zeitschrift
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Affiliations:
Ort, Verlag, Ausgabe: Cambridge, Mass. : Cell Press
Seiten: - Band / Heft: 185 (26) Artikelnummer: - Start- / Endseite: 5040 - 5058 Identifikator: ISSN: 0092-8674
CoNE: https://pure.mpg.de/cone/journals/resource/954925463183