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  TREES toolbox - code for neuronal branching

Cuntz, H. (2014). TREES toolbox - code for neuronal branching. In D. Jaeger, & R. Jung (Eds.), Encyclopedia of computational neuroscience (pp. 1-5). New York: Springer. doi:10.1007/978-1-4614-7320-6_793-2.

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Item Permalink: https://hdl.handle.net/21.11116/0000-000C-9F5D-A Version Permalink: https://hdl.handle.net/21.11116/0000-000C-9F5E-9
Genre: Book Chapter

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https://link.springer.com/referenceworkentry/10.1007/978-1-4614-7320-6_793-2 (Publisher version)
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 Creators:
Cuntz, Hermann1, 2, Author                 
Affiliations:
1Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Max Planck Society, ou_2074314              
2Cuntz Lab, Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Max Planck Society, Deutschordenstraße 46, 60528 Frankfurt, DE, ou_3381227              

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Free keywords: Neural Circuit Amacrine Cell Dendritic Tree Neuronal Morphology Neuronal Tree
 Abstract: Definition

The TREES toolbox is a software package in MATLAB (MathWorks) that provides tools for reconstructing neuronal branching structures from microscopy image stacks and for generating synthetic axonal and dendritic trees. Furthermore, it enables the analysis, visualization, and editing of these trees for which it provides a large set of dedicated MATLAB functions. The TREES toolbox is freely available as open source at www.treestoolbox.org.

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 Dates: 2014-02-132014
 Publication Status: Issued
 Pages: -
 Publishing info: -
 Table of Contents: -
 Rev. Type: Peer
 Identifiers: DOI: 10.1007/978-1-4614-7320-6_793-2
 Degree: -

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Title: Encyclopedia of computational neuroscience
Source Genre: Encyclopedia
 Creator(s):
Jaeger, Dieter, Editor
Jung, Ranu, Editor
Affiliations:
-
Publ. Info: New York : Springer
Pages: - Volume / Issue: - Sequence Number: - Start / End Page: 1 - 5 Identifier: DOI: 10.1007/978-1-4614-7320-6