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  The FORCIS database: A global census of planktonic Foraminifera from ocean waters

Chaabane, S., de Garidel-Thoron, T., Giraud, X., Schiebel, R., Beaugrand, G., Brummer, G.-J., et al. (2023). The FORCIS database: A global census of planktonic Foraminifera from ocean waters. Scientific Data, 10: 354 (2023). doi:10.1038/s41597-023-02264-2.

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https://www.nature.com/articles/s41597-023-02264-2.pdf (Verlagsversion)
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 Urheber:
Chaabane, Sonia, Autor
de Garidel-Thoron, Thibault, Autor
Giraud, Xavier, Autor
Schiebel, Ralf1, Autor           
Beaugrand, Gregory, Autor
Brummer, Geert-Jan, Autor
Casajus, Nicolas, Autor
Greco, Mattia, Autor
Grigoratou, Maria, Autor
Howa, Hélène, Autor
Jonkers, Lukas, Autor
Kucera, Michal, Autor
Kuroyanagi, Azumi, Autor
Meilland, Julie, Autor
Monteiro, Fanny, Autor
Mortyn, Graham, Autor
Almogi-Labin, Ahuva, Autor
Asahi, Hirofumi, Autor
Avnaim-Katav, Simona, Autor
Bassinot, Franck, Autor
Davis, Catherine V., AutorField, David B., AutorHernández-Almeida, Iván, AutorHerut, Barak, AutorHosie, Graham, AutorHoward, Will, AutorJentzen, Anna, AutorJohns, David G., AutorKeigwin, Lloyd, AutorKitchener, John, AutorKohfeld, Karen E., AutorLessa, Douglas V. O., AutorManno, Clara, AutorMarchant, Margarita, AutorOfstad, Siri, AutorOrtiz, Joseph D., AutorPost, Alexandra, AutorRigual-Hernandez, Andres, AutorRillo, Marina C., AutorRobinson, Karen, AutorSagawa, Takuya, AutorSierro, Francisco, AutorTakahashi, Kunio T., AutorTorfstein, Adi, AutorVenancio, Igor, AutorYamasaki, Makoto , AutorZiveri, Patrizia, Autor mehr..
Affiliations:
1Climate Geochemistry, Max Planck Institute for Chemistry, Max Planck Society, ou_2237635              

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Schlagwörter: -
 Zusammenfassung: The data currently described was generated within the EU/FP7 HeCaToS project (Hepatic and Cardiac Toxicity Systems modeling). The project aimed to develop an in silico prediction system to contribute to drug safety assessment for humans. For this purpose, multi-omics data of repeated dose toxicity were obtained for 10 hepatotoxic and 10 cardiotoxic compounds. Most data were gained from in vitro experiments in which 3D microtissues (either hepatic or cardiac) were exposed to a therapeutic (physiologically relevant concentrations calculated through PBPK-modeling) or a toxic dosing profile (IC20 after 7 days). Exposures lasted for 14 days and samples were obtained at 7 time points (therapeutic doses: 2-8-24-72-168-240-336 h; toxic doses 0-2-8-24-72-168-240 h). Transcriptomics (RNA sequencing & microRNA sequencing), proteomics (LC-MS), epigenomics (MeDIP sequencing) and metabolomics (LC-MS & NMR) data were obtained from these samples. Furthermore, functional endpoints (ATP content, Caspase3/7 and O2 consumption) were measured in exposed microtissues. Additionally, multi-omics data from human biopsies from patients are available. This data is now being released to the scientific community through the BioStudies data repository ( https://www.ebi.ac.uk/biostudies/ ).

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Sprache(n): eng - English
 Datum: 2023-05-24
 Publikationsstatus: Online veröffentlicht
 Seiten: 16
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: -
 Identifikatoren: DOI: 10.1038/s41597-023-02264-2
 Art des Abschluß: -

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Titel: Scientific Data
  Kurztitel : Sci. Data
Genre der Quelle: Zeitschrift
 Urheber:
Affiliations:
Ort, Verlag, Ausgabe: London, United Kingdom : Nature Publishing Group
Seiten: - Band / Heft: 10 Artikelnummer: 354 (2023) Start- / Endseite: - Identifikator: ISSN: 2052-4463
CoNE: https://pure.mpg.de/cone/journals/resource/2052-4463