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  Candidatus Alkanophaga archaea from Guaymas Basin hydrothermal vent sediment oxidize petroleum alkanes

Zehnle, H., Laso-Pérez, R., Lipp, J., Riedel, D., Merino, D. B., Teske, A., et al. (2023). Candidatus Alkanophaga archaea from Guaymas Basin hydrothermal vent sediment oxidize petroleum alkanes. Nature Microbiology, 8, 1199-1212. doi:10.1038/s41564-023-01400-3.

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Zehnle, Hanna, Author
Laso-Pérez, Rafael, Author
Lipp, Julius, Author
Riedel, Dietmar1, Author           
Merino, David Benito, Author
Teske, Andreas, Author
Wegener, Gunter, Author
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1Facility for Transmission Electron Microscopy Fassberg Campus, Max Planck Institute for Multidisciplinary Sciences, Max Planck Society, ou_3350297              

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 Abstract: Methanogenic and methanotrophic archaea produce and consume the greenhouse gas methane, respectively, using the reversible enzyme methyl-coenzyme M reductase (Mcr). Recently, Mcr variants that can activate multicarbon alkanes have been recovered from archaeal enrichment cultures. These enzymes, called alkyl-coenzyme M reductase (Acrs), are widespread in the environment but remain poorly understood. Here we produced anoxic cultures degrading mid-chain petroleum n-alkanes between pentane (C5) and tetradecane (C14) at 70 °C using oil-rich Guaymas Basin sediments. In these cultures, archaea of the genus Candidatus Alkanophaga activate the alkanes with Acrs and completely oxidize the alkyl groups to CO2. Ca. Alkanophaga form a deep-branching sister clade to the methanotrophs ANME-1 and are closely related to the short-chain alkane oxidizers Ca. Syntrophoarchaeum. Incapable of sulfate reduction, Ca. Alkanophaga shuttle electrons released from alkane oxidation to the sulfate-reducing Ca. Thermodesulfobacterium syntrophicum. These syntrophic consortia are potential key players in petroleum degradation in heated oil reservoirs.

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Language(s): eng - English
 Dates: 2023-06-01
 Publication Status: Published online
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 Rev. Type: Peer
 Identifiers: DOI: 10.1038/s41564-023-01400-3
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Project name : This study was funded by the DFG under Germany’s Excellence Initiative/Strategy through the Clusters of Excellence EXC 2077 ‘The Ocean Floor—Earth’s Uncharted Interface’ (project no. 390741601), the Andreas Rühl Foundation and the Max Planck Society. R.L.-P. was funded by a Juan de la Cierva grant (FJC2019-041362-I) from the Spanish Ministerio de Ciencia e Innovación. The Guaymas Basin expedition was supported by the National Science Foundation, Biological Oceanography grant no. 1357238 to A.T. (Collaborative Research: Microbial Carbon cycling and its interactions with Sulfur and Nitrogen transformations in Guaymas Basin hydrothermal sediments). We thank the captain and crew of RV Atlantis for their excellent work during the expedition AT42-05; H. Taubner and M. Alisch for analytical measurements; S. Menger for technical support in the laboratory; K. Knittel and A. Ellrott for sharing their experience with CARD-FISH and microscopy; and A. Boetius for fruitful scientific discussions.
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Title: Nature Microbiology
  Abbreviation : Nat. Microbiol.
Source Genre: Journal
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Publ. Info: London, UK : Nature Publishing Group
Pages: - Volume / Issue: 8 Sequence Number: - Start / End Page: 1199 - 1212 Identifier: ISSN: 2058-5276
CoNE: https://pure.mpg.de/cone/journals/resource/2058-5276