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  A joint proteomic and genomic investigation provides insights into the mechanism of calcification in coccolithophores

Skeffington, A. W., Fischer, A., Sviben, S., Brzezinka, M., Gorka, M., Bertinetti, L., et al. (2023). A joint proteomic and genomic investigation provides insights into the mechanism of calcification in coccolithophores. Nature Communications, 14: 3749. doi:10.1038/s41467-023-39336-1.

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 Creators:
Skeffington, A. W.1, Author           
Fischer, A.2, Author           
Sviben, Sanja1, Author           
Brzezinka , Magdalena3, Author
Gorka, M.4, Author           
Bertinetti, Luca3, Author
Woehle, Christian3, Author
Huettel, Bruno3, Author
Graf, A.4, Author           
Scheffel, A.1, Author           
Affiliations:
1Algal Biomineralization, Department Bock, Max Planck Institute of Molecular Plant Physiology, Max Planck Society, ou_1753322              
2BioinformaticsCIG, Infrastructure Groups and Service Units, Max Planck Institute of Molecular Plant Physiology, Max Planck Society, ou_1753303              
3external, ou_persistent22              
4Plant Proteomics, Department Stitt, Max Planck Institute of Molecular Plant Physiology, Max Planck Society, ou_1950285              

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 Abstract: Coccolithophores are globally abundant, calcifying microalgae that have profound effects on marine biogeochemical cycles, the climate, and life in the oceans. They are characterized by a cell wall of CaCO3 scales called coccoliths, which may contribute to their ecological success. The intricate morphologies of coccoliths are of interest for biomimetic materials synthesis. Despite the global impact of coccolithophore calcification, we know little about the molecular machinery underpinning coccolithophore biology. Working on the model Emiliania huxleyi, a globally distributed bloom-former, we deploy a range of proteomic strategies to identify coccolithogenesis-related proteins. These analyses are supported by a new genome, with gene models derived from long-read transcriptome sequencing, which revealed many novel proteins specific to the calcifying haptophytes. Our experiments provide insights into proteins involved in various aspects of coccolithogenesis. Our improved genome, complemented with transcriptomic and proteomic data, constitutes a new resource for investigating fundamental aspects of coccolithophore biology.

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Language(s): eng - English
 Dates: 2023-06-232023-06
 Publication Status: Issued
 Pages: -
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 Table of Contents: -
 Rev. Type: -
 Identifiers: DOI: 10.1038/s41467-023-39336-1
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Title: Nature Communications
  Abbreviation : Nat. Commun.
Source Genre: Journal
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Publ. Info: London : Nature Publishing Group
Pages: - Volume / Issue: 14 Sequence Number: 3749 Start / End Page: - Identifier: ISSN: 2041-1723
CoNE: https://pure.mpg.de/cone/journals/resource/2041-1723