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  Interlaboratory Variability in the Madin-Darby Canine Kidney Cell Proteome

Harwood, M. D., Zettl, K., Weinheimer, M., Pilla-Reddy, V., Shen, H., Jacobs, F., Chu, X., Huth, F., Nakakariya, M., Chothe, P. P., Neuhoff, S., & Wiśniewski, J. R. (2023). Interlaboratory Variability in the Madin-Darby Canine Kidney Cell Proteome. Molecular Pharmaceutics, 20(7), 3505-3518. doi:10.1021/acs.molpharmaceut.3c00108.

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アイテムのパーマリンク: https://hdl.handle.net/21.11116/0000-000D-69BA-C 版のパーマリンク: https://hdl.handle.net/21.11116/0000-000D-69BB-B
資料種別: 学術論文

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 作成者:
Harwood, Matthew D.1, 著者
Zettl, Katharina2, 著者           
Weinheimer, Manuel1, 著者
Pilla-Reddy, Venkatesh1, 著者
Shen, Hong1, 著者
Jacobs, Frank1, 著者
Chu, Xiaoyan1, 著者
Huth, Felix1, 著者
Nakakariya, Masanori1, 著者
Chothe, Paresh P.1, 著者
Neuhoff, Sibylle1, 著者
Wiśniewski, Jacek R.2, 著者                 
所属:
1external, ou_persistent22              
2Mann, Matthias / Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Max Planck Society, ou_1565159              

内容説明

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キーワード: SPECTROMETRY-BASED QUANTIFICATION; MULTIENZYME DIGESTION FASP; CANCER RESISTANCE PROTEIN; MDCK CELLS; P-GLYCOPROTEIN; CACO-2 CELLS; DRUG TRANSPORTERS; 2 STRAINS; ABSOLUTE QUANTIFICATION; MULTIDRUG-RESISTANCEResearch & Experimental Medicine; Pharmacology & Pharmacy; Label-freeproteomics; total protein analysis (TPA); MDCK; epithelial proteome; ADME protein abundances;
 要旨: Madin-Darbycanine kidney (MDCK) cells are widely used tostudy epithelial cell functionality. Their low endogenous drug transporterprotein levels make them an amenable system to investigate transepithelialpermeation and drug transporter protein activity after their transfection.MDCK cells display diverse phenotypic traits, and as such, laboratory-to-laboratoryvariability in drug permeability assessments is observed. Consequently,in vitro-in vivo extrapolation (IVIVE) approaches using permeabilityand/or transporter activity data require calibration. A comprehensiveproteomic quantification of 11 filter-grown parental or mock-transfectedMDCK monolayers from 8 different pharmaceutical laboratories usingthe total protein approach (TPA) is provided. The TPA enables estimationsof key morphometric parameters such as monolayer cellularity and volume.Overall, metabolic liability to xenobiotics is likely to be limitedfor MDCK cells due to the low expression of required enzymes. SLC16A1 (MCT1) was the highest abundant SLC transporterlinked to xenobiotic activity, while ABCC4 (MRP4)was the highest abundant ABC transporter. Our data supports existingfindings that claudin-2 levels may be linked to tight junction modulation,thus impacting trans-epithelial resistance. This unique database providesdata on more than 8000 protein copy numbers and concentrations, thusallowing an in-depth appraisal of the control monolayers used in eachlaboratory.

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言語: eng - English
 日付: 2023-06-072023-07-03
 出版の状態: 出版
 ページ: 14
 出版情報: -
 目次: -
 査読: 査読あり
 識別子(DOI, ISBNなど): ISI: 001008545300001
DOI: 10.1021/acs.molpharmaceut.3c00108
 学位: -

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出版物 1

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出版物名: Molecular Pharmaceutics
種別: 学術雑誌
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出版社, 出版地: Washington, DC : American Chemical Society
ページ: - 巻号: 20 (7) 通巻号: - 開始・終了ページ: 3505 - 3518 識別子(ISBN, ISSN, DOIなど): ISSN: 1543-8384
CoNE: https://pure.mpg.de/cone/journals/resource/1543-8384