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  Efficient high-precision homology-directed repair-dependent genome editing by HDRobust

Riesenberg, S., Kanis, P., Macak, D., Wollny, D., Düsterhöft, D., Kowalewski, J., et al. (2023). Efficient high-precision homology-directed repair-dependent genome editing by HDRobust. Nature Methods, 20, 1388-1399. doi:10.1038/s41592-023-01949-1.

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Riesenberg_Efficient_NatMeth_2023.pdf (Verlagsversion), 10MB
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 Urheber:
Riesenberg, Stephan1, 2, 3, Autor                 
Kanis, Philipp1, 2, Autor                 
Macak, Dominik1, Autor           
Wollny, Damian4, Autor                 
Düsterhöft, Dorothee1, Autor           
Kowalewski, Johannes1, Autor           
Helmbrecht, Nelly1, 2, Autor                 
Maricic, Tomislav1, Autor                 
Pääbo, Svante1, 2, 5, Autor                 
Affiliations:
1Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Max Planck Society, ou_1497672              
2The Leipzig School of Human Origins (IMPRS), Max Planck Institute for Evolutionary Anthropology, Max Planck Society, Deutscher Platz 6, 04103 Leipzig, DE, ou_1497688              
3Genome Engineering and Repair, Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Max Planck Society, ou_3557290              
4Single Cell Genomics, Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Max Planck Society, ou_2173644              
5Neandertals and more, Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Max Planck Society, Deutscher Platz 6, 04103 Leipzig, DE, ou_2074328              

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 Zusammenfassung: Homology-directed repair (HDR), a method for repair of DNA
double-stranded breaks can be leveraged for the precise introduction
of mutations supplied by synthetic DNA donors, but remains limited by
low efficiency and off-target effects. In this study, we report HDRobust,
a high-precision method that, via the combined transient inhibition of
nonhomologous end joining and microhomology-mediated end joining,
resulted in the induction of point mutations by HDR in up to 93% (median
60%, s.e.m. 3) of chromosomes in populations of cells. We found that, using
this method, insertions, deletions and rearrangements at the target site, as
well as unintended changes at other genomic sites, were largely abolished.
We validated this approach for 58 different target sites and showed that it
allows efficient correction of pathogenic mutations in cells derived from
patients suffering from anemia, sickle cell disease and thrombophilia.

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Sprache(n): eng - English
 Datum: 2023-07-202023
 Publikationsstatus: Erschienen
 Seiten: -
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: DOI: 10.1038/s41592-023-01949-1
 Art des Abschluß: -

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Titel: Nature Methods
Genre der Quelle: Zeitschrift
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Ort, Verlag, Ausgabe: -
Seiten: - Band / Heft: 20 Artikelnummer: - Start- / Endseite: 1388 - 1399 Identifikator: ISSN: 1548-7091
ISSN: 1548-7105