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  RNA origami: design, simulation and application

Poppleton, E., Urbanek, N., Chakraborty, T., Griffo, A., Monari, L., & Göpfrich, K. (2023). RNA origami: design, simulation and application. RNA Biology, 20(1), 510-524. doi:10.1080/15476286.2023.2237719.

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 Creators:
Poppleton, Erik1, Author           
Urbanek, Niklas1, Author           
Chakraborty, Taniya1, Author           
Griffo, Alessandra1, Author           
Monari, Luca, Author
Göpfrich, Kerstin2, Author           
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1Max Planck Institute for Medical Research, Max Planck Society, ou_1125545              
2Cellular Biophysics, Max Planck Institute for Medical Research, Max Planck Society, ou_2364731              

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Free keywords: RNA origami; RNA nanotechnology; DNA origami; co-transcriptional folding; RNA nanostructures; genetic encoding; computational design; molecular simulation
 Abstract: Design strategies for DNA and RNA nanostructures have developed along parallel lines for the past 30 years, from small structural motifs derived from biology to large ‘origami’ structures with thousands to tens of thousands of bases. With the recent publication of numerous RNA origami structures and improved design methods-even permitting co-transcriptional folding of kilobase-sized structures – the RNA nanotechnolgy field is at an inflection point. Here, we review the key achievements which inspired and enabled RNA origami design and draw comparisons with the development and applications of DNA origami structures. We further present the available computational tools for the design and the simulation, which will be key to the growth of the RNA origami community. Finally, we portray the transition from RNA origami structure to function. Several functional RNA origami structures exist already, their expression in cells has been demonstrated and first applications in cell biology have already been realized. Overall, we foresee that the fast-paced RNA origami field will provide new molecular hardware for biophysics, synthetic biology and biomedicine, complementing the DNA origami toolbox.

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Language(s): eng - English
 Dates: 2023-06-202023-07-122023-07-272023-01
 Publication Status: Issued
 Pages: 16
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 Table of Contents: -
 Rev. Type: Peer
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Title: RNA Biology
Source Genre: Journal
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Publ. Info: Philadelphia, Pa : Taylor & Francis
Pages: - Volume / Issue: 20 (1) Sequence Number: - Start / End Page: 510 - 524 Identifier: ISSN: 1547-6286
CoNE: https://pure.mpg.de/cone/journals/resource/1000000000021460