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  A joint proteomic and genomic investigation provides insights into the mechanism of calcification in coccolithophores

Skeffington, A., Fischer, A., Sviben, S., Brzezinka, M., Górka, M., Bertinetti, L., et al. (2023). A joint proteomic and genomic investigation provides insights into the mechanism of calcification in coccolithophores. Nature Communications, 14: 3749. doi:10.1038/s41467-023-39336-1.

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Skeffington, Alastair, Author
Fischer, Axel, Author
Sviben, Sanja, Author
Brzezinka, Magdalena, Author
Górka, Michał, Author
Bertinetti, Luca1, Author                 
Woehle, Christian, Author
Huettel, Bruno, Author
Graf, Alexander, Author
Scheffel, André, Author
Affiliations:
1Luca Bertinetti, Biomaterialien, Max Planck Institute of Colloids and Interfaces, Max Planck Society, ou_2379691              

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 Abstract: Coccolithophores are globally abundant, calcifying microalgae that have profound effects on marine biogeochemical cycles, the climate, and life in the oceans. They are characterized by a cell wall of CaCO<sub>3<\sub> scales called coccoliths, which may contribute to their ecological success. The intricate morphologies of coccoliths are of interest for biomimetic materials synthesis. Despite the global impact of coccolithophore calcification, we know little about the molecular machinery underpinning coccolithophore biology. Working on the model Emiliania huxleyi, a globally distributed bloom-former, we deploy a range of proteomic strategies to identify coccolithogenesis-related proteins. These analyses are supported by a new genome, with gene models derived from long-read transcriptome sequencing, which revealed many novel proteins specific to the calcifying haptophytes. Our experiments provide insights into proteins involved in various aspects of coccolithogenesis. Our improved genome, complemented with transcriptomic and proteomic data, constitutes a new resource for investigating fundamental aspects of coccolithophore biology.

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Language(s): eng - English
 Dates: 2023-06-232023
 Publication Status: Issued
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 Identifiers: DOI: 10.1038/s41467-023-39336-1
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Title: Nature Communications
  Abbreviation : Nat. Commun.
Source Genre: Journal
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Publ. Info: London : Springer Nature
Pages: - Volume / Issue: 14 Sequence Number: 3749 Start / End Page: - Identifier: ISSN: 2041-1723