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Zusammenfassung:
Nanopore sequencing can be used to track microbes in real-time. Its ability to swiftly generate high-quality de novo assemblies makes it especially useful for metagenomics. However, for those lacking a computational biology background, the selection and usage of appropriate software tools pose a challenge. We've developed MMonitor, an integrated software solution, combining bioinformatics pipelines with a visualization platform. It was initially designed for bioreactor monitoring, but can be used for all nanopore metagenome sequencing data. MMonitor allows scientists to conduct efficient metagenome analyses, such as taxonomic and functional gene analysis, with a user-friendly GUI or a command line interface. The results, viewable both locally or remotely via a web server, make it accessible for data exploration and metagenome tracking.
