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  Insights and improvements in correspondence between axonal volume fraction measured with diffusion‐weighted MRI and electron microscopy

Papazoglou, S., Ashtarayeh, M., Oeschger, J. M., Callaghan, M. F., Does, M. D., & Mohammadi, S. (2024). Insights and improvements in correspondence between axonal volume fraction measured with diffusion‐weighted MRI and electron microscopy. NMR in Biomedicine, 37(3): e5070. doi:10.1002/nbm.5070.

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Papazoglou, Sebastian1, 2, Author
Ashtarayeh, Mohammad1, Author
Oeschger, Jan Malte1, Author
Callaghan, Martina F.3, Author
Does, Mark D.4, 5, 6, 7, Author
Mohammadi, Siawoosh1, 2, 8, Author           
Affiliations:
1Department of Systems Neuroscience, University Medical Center Hamburg-Eppendorf, Germany, ou_persistent22              
2Max Planck Research Group MR Physics, Max Planck Institute for Human Development, Berlin, Germany, ou_persistent22              
3Wellcome Centre for Human Neuroimaging, UCL Queen Square Institute of Neurology, London, United Kingdom, ou_persistent22              
4Department of Biomedical Engineering, Vanderbilt University, Nashville, TN, USA, ou_persistent22              
5Institute of Imaging Science, Vanderbilt University Medical Center, Nashville, TN, USA, ou_persistent22              
6Department of Radiology and Radiological Sciences, Vanderbilt University, Nashville, TN, USA, ou_persistent22              
7Department of Electrical Engineering and Computer Science, Vanderbilt University, Nashville, TN, USA, ou_persistent22              
8Department Neurophysics (Weiskopf), MPI for Human Cognitive and Brain Sciences, Max Planck Society, ou_2205649              

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Free keywords: Axonal volume fraction; Axonal water fraction; Biophysical model; Calibration; Diffusion-weighted imaging; g ratio; Histology reference; Unmyelinated axons
 Abstract: Biophysical diffusion-weighted imaging (DWI) models are increasingly used in neuroscience to estimate the axonal water fraction (fAW), which in turn is key for noninvasive estimation of the axonal volume fraction (fA). These models require thorough validation by comparison with a reference method, for example, electron microscopy (EM). While EM studies often neglect the unmyelinated axons and solely report the fraction of myelinated axons, in DWI both myelinated and unmyelinated axons contribute to the DWI signal. However, DWI models often include simplifications, for example, the neglect of differences in the compartmental relaxation times or fixed diffusivities, which in turn might affect the estimation of fAW. We investigate whether linear calibration parameters (scaling and offset) can improve the comparability between EM- and DWI-based metrics of fA. To this end, we (a) used six DWI models based on the so-called standard model of white matter (WM), including two models with fixed compartmental diffusivities (e.g., neurite orientation dispersion and density imaging, NODDI) and four models that fitted the compartmental diffusivities (e.g., white matter tract integrity, WMTI), and (b) used a multimodal data set including ex vivo diffusion DWI and EM data in mice with a broad dynamic range of fibre volume metrics. We demonstrated that the offset is associated with the volume fraction of unmyelinated axons and the scaling factor is associated with different compartmental T2 and can substantially enhance the comparability between EM- and DWI-based metrics of fA. We found that DWI models that fitted compartmental diffusivities provided the most accurate estimates of the EM-based fA. Finally, we introduced a more efficient hybrid calibration approach, where only the offset is estimated but the scaling is fixed to a theoretically predicted value. Using this approach, a similar one-to-one correspondence to EM was achieved for WMTI. The method presented can pave the way for use of validated DWI-based models in clinical research and neuroscience.

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Language(s): eng - English
 Dates: 2023-09-252022-10-312023-10-192023-12-142024-03
 Publication Status: Issued
 Pages: -
 Publishing info: -
 Table of Contents: -
 Rev. Type: -
 Identifiers: DOI: 10.1002/nbm.5070
Other: epub 2023
PMID: 38098204
 Degree: -

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Project name : -
Grant ID : MO 2397/5-1; MO 2397/52; MO 2397/4-1; MO 2397/4-2
Funding program : -
Funding organization : German Research Foundation (DFG)
Project name : -
Grant ID : 01EW1711A; 01EW1711B
Funding program : -
Funding organization : Bundesministerium für Bildung und Forschung (BMBF)
Project name : -
Grant ID : 01fmthh2017
Funding program : -
Funding organization : Forschungszentrum Medizintechnik Hamburg
Project name : -
Grant ID : EB019980
Funding program : -
Funding organization : National Institute of Health (NIH)
Project name : -
Grant ID : MR/R000050/1
Funding program : -
Funding organization : MRC and Spinal Research Charity
Project name : -
Grant ID : 203147//Z/16/Z
Funding program : -
Funding organization : Wellcome Center

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Title: NMR in Biomedicine
Source Genre: Journal
 Creator(s):
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Publ. Info: London : Heyden & Son
Pages: - Volume / Issue: 37 (3) Sequence Number: e5070 Start / End Page: - Identifier: ISSN: 0952-3480
CoNE: https://pure.mpg.de/cone/journals/resource/954925574973