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  Engineering a synthetic energy-efficient formaldehyde assimilation cycle in Escherichia coli

Wu, T., Gómez-Coronado, P. A., Kubis, A., Lindner, S. N., Marlière, P., Erb, T. J., et al. (2023). Engineering a synthetic energy-efficient formaldehyde assimilation cycle in Escherichia coli. Nature Communications, 14(1): 8490. doi:10.1038/s41467-023-44247-2.

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https://doi.org/10.1038/s41467-023-44247-2 (Verlagsversion)
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 Urheber:
Wu, Tong1, Autor
Gómez-Coronado, Paul A.1, 2, Autor
Kubis, Armin1, Autor
Lindner, Steffen N.1, Autor
Marlière, Philippe1, Autor
Erb, Tobias J.2, Autor                 
Bar-Even, Arren1, Autor
He, Hai1, 2, Autor           
Affiliations:
1external, ou_persistent22              
2Understanding and Building Metabolism, Department of Biochemistry and Synthetic Metabolism, Max Planck Institute for Terrestrial Microbiology, Max Planck Society, ou_3266303              

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 Zusammenfassung: One-carbon (C1) substrates, such as methanol or formate, are attractive feedstocks for circular bioeconomy. These substrates are typically converted into formaldehyde, serving as the entry point into metabolism. Here, we design an erythrulose monophosphate (EuMP) cycle for formaldehyde assimilation, leveraging a promiscuous dihydroxyacetone phosphate dependent aldolase as key enzyme. In silico modeling reveals that the cycle is highly energy-efficient, holding the potential for high bioproduct yields. Dissecting the EuMP into four modules, we use a stepwise strategy to demonstrate in vivo feasibility of the modules in E. coli sensor strains with sarcosine as formaldehyde source. From adaptive laboratory evolution for module integration, we identify key mutations enabling the accommodation of the EuMP reactions with endogenous metabolism. Overall, our study demonstrates the proof-of-concept for a highly efficient, new-to-nature formaldehyde assimilation pathway, opening a way for the development of a methylotrophic platform for a C1-fueled bioeconomy in the future.

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Sprache(n): eng - English
 Datum: 2023
 Publikationsstatus: Erschienen
 Seiten: -
 Ort, Verlag, Ausgabe: -
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 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: URI: https://doi.org/10.1038/s41467-023-44247-2
Anderer: Wu2023
DOI: 10.1038/s41467-023-44247-2
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Titel: Nature Communications
Genre der Quelle: Zeitschrift
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Seiten: 8490 Band / Heft: 14 (1) Artikelnummer: 8490 Start- / Endseite: - Identifikator: ISBN: 2041-1723