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  Chloroplast Cell-Free Systems from Different Plant Species as a Rapid Prototyping Platform

Boehm, C. V., Inckemann, R., Burgis, M., Baumann, J., Brinkmann, C. K., Lipinska, K. E., et al. (2024). Chloroplast Cell-Free Systems from Different Plant Species as a Rapid Prototyping Platform. bioRxiv: the preprint server for biology, 2024.02.19.580994.

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 Creators:
Boehm, Clemens V.1, Author
Inckemann, René1, Author           
Burgis, Michael2, Author
Baumann, Jessica2, Author
Brinkmann, Cedric K.1, Author
Lipinska, Katarzyna E.1, Author
Gilles, Sara1, Author
Freudigmann, Jonas2, Author
Seiler, Vinca2, Author
Clark, Lauren G.2, Author
Jewett, Michael C.2, Author
Voll, Lars M.2, Author
Niederholtmeyer, Henrike2, Author
Affiliations:
1Understanding and Building Metabolism, Department of Biochemistry and Synthetic Metabolism, Max Planck Institute for Terrestrial Microbiology, Max Planck Society, ou_3266303              
2external, ou_persistent22              

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 Abstract: Climate change poses a significant threat to global agriculture, necessitating innovative solutions. Plant synthetic biology, particularly chloroplast engineering, holds promise as a viable approach to this challenge. Chloroplasts present a variety of advantageous traits for genetic engineering, but the development of genetic tools and genetic part characterization in these organelles is hindered by the lengthy timescales required to generate transplastomic organisms. To address these challenges, we have established a versatile protocol for generating chloroplast-based cell-free gene expression (CFE) systems derived from a diverse range of plant species, including wheat (monocot), spinach, and poplar trees (dicots). We show that these systems work with conventionally used T7 RNA polymerase, as well as the endogenous chloroplast polymerases, allowing for detailed characterization and prototyping of regulatory sequences at both transcription and translation levels. To demonstrate the platform for characterization of promoters and 5' and 3' untranslated regions (UTRs) in higher plant chloroplast gene expression, we analyze a collection of 23 5'UTRs, 10 3'UTRs, and 6 chloroplast promoters, assessed their expression in spinach and wheat extracts, and found consistency in expression patterns, suggesting cross-species compatibility. Looking forward, our chloroplast CFE systems open new avenues for plant synthetic biology, offering prototyping tools for both understanding gene expression and developing engineered plants, which could help meet the demands of a changing global climate.Competing Interest StatementThe authors have declared no competing interest.

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Language(s): eng - English
 Dates: 2024-02-19
 Publication Status: Issued
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 Table of Contents: -
 Rev. Type: No review
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Title: bioRxiv : the preprint server for biology
  Abbreviation : bioRxiv
Source Genre: Journal
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Pages: - Volume / Issue: - Sequence Number: 2024.02.19.580994 Start / End Page: - Identifier: ZDB: 2766415-6
CoNE: https://pure.mpg.de/cone/journals/resource/2766415-6