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  Sequential trypsin and ProAlanase digestions unearth immunological protein biomarkers shrouded by skeletal collagen

Wilkin, S., Lanigan, L. T., Montes, N., Sharma, M., Avanzi, C., Sejdiu, D., Majander, K., Pfrengle, S., Chiang, Y., Kunz, L., Dittmann, A., Rühli, F., Singh, P., Coll, M. F., Collins, M. J., Taurozzi, A. J., & Schuenemann, V. J. (2024). Sequential trypsin and ProAlanase digestions unearth immunological protein biomarkers shrouded by skeletal collagen. iScience, 27(5):. doi:10.1016/j.isci.2024.109663.

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アイテムのパーマリンク: https://hdl.handle.net/21.11116/0000-000F-391C-3 版のパーマリンク: https://hdl.handle.net/21.11116/0000-000F-391D-2
資料種別: 学術論文

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gea0225.pdf (出版社版), 5MB
ファイルのパーマリンク:
https://hdl.handle.net/21.11116/0000-000F-391E-1
ファイル名:
gea0225.pdf
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-
OA-Status:
Gold
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公開
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application/pdf / [MD5]
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-
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Supplemental information (付録資料)
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(last seen: April 2024)
OA-Status:
Miscellaneous

作成者

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 作成者:
Wilkin, Shevan1, 著者           
Lanigan, Liam T., 著者
Montes, Nuria, 著者
Sharma, Mukul, 著者
Avanzi, Charlotte, 著者
Sejdiu, Donikë, 著者
Majander, Kerttu, 著者
Pfrengle, Saskia, 著者
Chiang, Yun, 著者
Kunz, Laura, 著者
Dittmann, Antje, 著者
Rühli, Frank, 著者
Singh, Pushpendra, 著者
Coll, Maria Fontanals, 著者
Collins, Matthew J., 著者
Taurozzi, Alberto J., 著者
Schuenemann, Verena J., 著者
所属:
1Department of Archaeology, Max Planck Institute of Geoanthropology, Max Planck Society, ou_3398738              

内容説明

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キーワード: Biochemistry, Biochemistry applications, Biochemistry methods, Medical biochemistry, Proteomics
 要旨: This study investigates the efficacy of proteomic analysis of human remains to identify active infections in the past through the detection of pathogens and the host response to infection. We advance leprosy as a case study due to the sequestering of sufferers in leprosaria and the suggestive skeletal lesions that can result from the disease. Here we present a sequential enzyme extraction protocol, using trypsin followed by ProAlanase, to reduce the abundance of collagen peptides and in so doing increase the detection of non-collagenous proteins. Through our study of five individuals from an 11th to 18th century leprosarium, as well as four from a contemporaneous non-leprosy associated cemetery in Barcelona, we show that samples from 2 out of 5 leprosarium individuals extracted with the sequential digestion methodology contain numerous host immune proteins associated with modern leprosy. In contrast, individuals from the non-leprosy associated cemetery and all samples extracted with a trypsin-only protocol did not. Through this study, we advance a palaeoproteomic methodology to gain insights into the health of archaeological individuals and take a step toward a proteomics-based method to study immune responses in past populations.

資料詳細

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言語: eng - English
 日付: 2023-03-172024-04-022024-04-032024-05-17
 出版の状態: 出版
 ページ: 18
 出版情報: -
 目次: Introduction
Results
Sampling and M. leprae screening of non-leprosarium individuals
M. leprae genomes recovered from leprosarium individuals, but not from non-leprosarium individuals
More non-collagenous proteins recovered with trypsin/ProAlanase than trypsin alone
Bone and dentine samples contain similar immune proteins
Pellet and supernatant fractions contain similar number of immune-related proteins
SDS and GuHCl protocols result in similar overall and immune protein recovery
More immune proteins recovered from leprosarium individuals
Discussion
Conclussion
 査読: 査読あり
 識別子(DOI, ISBNなど): DOI: 10.1016/j.isci.2024.109663
その他: gea0225
 学位: -

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出版物 1

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出版物名: iScience
種別: 学術雑誌
 著者・編者:
所属:
出版社, 出版地: Amsterdam ; Bosten ; London ; New York ; Oxford ; Paris ; Philadelphia ; San Diego ; St. Louis : Elsevier
ページ: - 巻号: 27 (5) 通巻号: 109663 開始・終了ページ: - 識別子(ISBN, ISSN, DOIなど): ISSN: 2589-0042
CoNE: https://pure.mpg.de/cone/journals/resource/2589-0042