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  Sequential trypsin and ProAlanase digestions unearth immunological protein biomarkers shrouded by skeletal collagen

Wilkin, S., Lanigan, L. T., Montes, N., Sharma, M., Avanzi, C., Sejdiu, D., et al. (2024). Sequential trypsin and ProAlanase digestions unearth immunological protein biomarkers shrouded by skeletal collagen. iScience, 27(5): 109663. doi:10.1016/j.isci.2024.109663.

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 Urheber:
Wilkin, Shevan1, Autor           
Lanigan, Liam T., Autor
Montes, Nuria, Autor
Sharma, Mukul, Autor
Avanzi, Charlotte, Autor
Sejdiu, Donikë, Autor
Majander, Kerttu, Autor
Pfrengle, Saskia, Autor
Chiang, Yun, Autor
Kunz, Laura, Autor
Dittmann, Antje, Autor
Rühli, Frank, Autor
Singh, Pushpendra, Autor
Coll, Maria Fontanals, Autor
Collins, Matthew J., Autor
Taurozzi, Alberto J., Autor
Schuenemann, Verena J., Autor
Affiliations:
1Department of Archaeology, Max Planck Institute of Geoanthropology, Max Planck Society, ou_3398738              

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Schlagwörter: Biochemistry, Biochemistry applications, Biochemistry methods, Medical biochemistry, Proteomics
 Zusammenfassung: This study investigates the efficacy of proteomic analysis of human remains to identify active infections in the past through the detection of pathogens and the host response to infection. We advance leprosy as a case study due to the sequestering of sufferers in leprosaria and the suggestive skeletal lesions that can result from the disease. Here we present a sequential enzyme extraction protocol, using trypsin followed by ProAlanase, to reduce the abundance of collagen peptides and in so doing increase the detection of non-collagenous proteins. Through our study of five individuals from an 11th to 18th century leprosarium, as well as four from a contemporaneous non-leprosy associated cemetery in Barcelona, we show that samples from 2 out of 5 leprosarium individuals extracted with the sequential digestion methodology contain numerous host immune proteins associated with modern leprosy. In contrast, individuals from the non-leprosy associated cemetery and all samples extracted with a trypsin-only protocol did not. Through this study, we advance a palaeoproteomic methodology to gain insights into the health of archaeological individuals and take a step toward a proteomics-based method to study immune responses in past populations.

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Sprache(n): eng - English
 Datum: 2023-03-172024-04-022024-04-032024-05-17
 Publikationsstatus: Erschienen
 Seiten: 18
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: Introduction
Results
Sampling and M. leprae screening of non-leprosarium individuals
M. leprae genomes recovered from leprosarium individuals, but not from non-leprosarium individuals
More non-collagenous proteins recovered with trypsin/ProAlanase than trypsin alone
Bone and dentine samples contain similar immune proteins
Pellet and supernatant fractions contain similar number of immune-related proteins
SDS and GuHCl protocols result in similar overall and immune protein recovery
More immune proteins recovered from leprosarium individuals
Discussion
Conclussion
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: DOI: 10.1016/j.isci.2024.109663
Anderer: gea0225
 Art des Abschluß: -

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Titel: iScience
Genre der Quelle: Zeitschrift
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Affiliations:
Ort, Verlag, Ausgabe: Amsterdam ; Bosten ; London ; New York ; Oxford ; Paris ; Philadelphia ; San Diego ; St. Louis : Elsevier
Seiten: - Band / Heft: 27 (5) Artikelnummer: 109663 Start- / Endseite: - Identifikator: ISSN: 2589-0042
CoNE: https://pure.mpg.de/cone/journals/resource/2589-0042