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  High Throughput Tomography (HiTT) on EMBL beamline P14 on PETRA III

Albers, J., Nikolova, M., Svetlove, A., Darif, N., Lawson, M. J., Schneider, T. R., et al. (2024). High Throughput Tomography (HiTT) on EMBL beamline P14 on PETRA III. Journal of Synchrotron Radiation, 31(Part 1), 186-194. doi:10.1107/S160057752300944X.

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 Urheber:
Albers, Jonas, Autor
Nikolova, Marina, Autor
Svetlove, Angelika1, Autor           
Darif, Nedal, Autor
Lawson, Matthew J., Autor
Schneider, Thomas R., Autor
Schwab, Yannick, Autor
Bourenkov, Gleb, Autor
Duke, Elizabeth, Autor
Affiliations:
1Research Group of Translational Molecular Imaging, Max Planck Institute for Multidisciplinary Sciences, Max Planck Society, ou_3350306              

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Schlagwörter: X-ray tomography; phase-contrast imaging; beamlines; biology.
 Zusammenfassung: Here, high-throughput tomography (HiTT), a fast and versatile phase-contrast imaging platform for life-science samples on the EMBL beamline P14 at DESY in Hamburg, Germany, is presented. A high-photon-flux undulator beamline is used to perform tomographic phase-contrast acquisition in about two minutes which is linked to an automated data processing pipeline that delivers a 3D reconstructed data set less than a minute and a half after the completion of the X-ray scan. Combining this workflow with a sophisticated robotic sample changer enables the streamlined collection and reconstruction of X-ray imaging data from potentially hundreds of samples during a beam-time shift. HiTT permits optimal data collection for many different samples and makes possible the imaging of large sample cohorts thus allowing population studies to be attempted. The successful application of HiTT on various soft tissue samples in both liquid (hydrated and also dehydrated) and paraffin-embedded preparations is demonstrated. Furthermore, the feasibility of HiTT to be used as a targeting tool for volume electron microscopy, as well as using HiTT to study plant morphology, is demonstrated. It is also shown how the high-throughput nature of the work has allowed large numbers of `identical' samples to be imaged to enable statistically relevant sample volumes to be studied.

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Sprache(n): eng - English
 Datum: 2024-012024
 Publikationsstatus: Erschienen
 Seiten: -
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: DOI: 10.1107/S160057752300944X
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Titel: Journal of Synchrotron Radiation
  Kurztitel : J. Synchrotron Radiat.
Genre der Quelle: Zeitschrift
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Affiliations:
Ort, Verlag, Ausgabe: Wiley-Blackwell on behalf of the IUCr
Seiten: - Band / Heft: 31 (Part 1) Artikelnummer: - Start- / Endseite: 186 - 194 Identifikator: ISSN: 1600-5775
ISSN: 0909-0495
CoNE: https://pure.mpg.de/cone/journals/resource/954925562624