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  Advancing chloroplast synthetic biology through high-throughput plastome engineering of Chlamydomonas reinhardtii

Inckemann, R., Chotel, T., Brinkmann, C. K., Burgis, M., Andreas, L., Baumann, J., et al. (2024). Advancing chloroplast synthetic biology through high-throughput plastome engineering of Chlamydomonas reinhardtii. bioRxiv: the preprint server for biology, 2024.05.08.593163.

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https://doi.org/10.1101/2024.05.08.593163 (Preprint)
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 Urheber:
Inckemann, René1, Autor           
Chotel, Tanguy1, Autor           
Brinkmann, Cedric Kilian1, Autor
Burgis, Michael1, Autor
Andreas, Laura1, Autor
Baumann, Jessica1, Autor
Sharma, Priyati1, Autor
Klose, Melanie1, Autor           
Barret, James2, Autor
Ries, Fabian2, Autor
Paczia, Nicole3, Autor                 
Glatter, Timo4, Autor                 
Mackinder, Luke2, Autor
Willmund, Felix2, Autor
Erb, Tobias J.1, Autor                 
Affiliations:
1Understanding and Building Metabolism, Department of Biochemistry and Synthetic Metabolism, Max Planck Institute for Terrestrial Microbiology, Max Planck Society, ou_3266303              
2external, ou_persistent22              
3Core Facility Metabolomics and small Molecules Mass Spectrometry, Max Planck Institute for Terrestrial Microbiology, Max Planck Society, ou_3266267              
4Core Facility Mass Spectrometry and Proteomics, Max Planck Institute for Terrestrial Microbiology, Max Planck Society, ou_3266266              

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 Zusammenfassung: Chloroplast synthetic biology holds promise for developing improved crops through improving the function of plastids. However, chloroplast engineering efforts face limitations due to the scarcity of genetic tools and the low throughput of plant-based systems. To address these challenges, we here established Chlamydomonas reinhardtii as a prototyping chassis for chloroplast synthetic biology. We developed an automation workflow that enables the generation, handling, and analysis of thousands of transplastomic strains in parallel, expanded the repertoire of selection markers for chloroplast transformation, established new reporter genes, and characterized over 140 regulatory parts, including native and synthetic promoters, UTRs, and intercistronic expression elements. We integrated the system within the Phytobrick cloning standard and demonstrate several applications, including a library-based approach to develop synthetic promoter designs in plastids. Finally, we provide a proof-of-concept for prototyping novel traits in plastids by introducing a chloroplast-based synthetic photorespiration pathway and demonstrating a twofold increase in biomass production. Overall, our study advances chloroplast engineering, and provides a promising platform to rapidly prototype chloroplast manipulations before their transfer into higher plants and crops.Competing Interest StatementThe authors have declared no competing interest.

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Sprache(n): eng - English
 Datum: 2024-05-10
 Publikationsstatus: Erschienen
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 Art der Begutachtung: Keine Begutachtung
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Titel: bioRxiv : the preprint server for biology
  Kurztitel : bioRxiv
Genre der Quelle: Zeitschrift
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Seiten: - Band / Heft: - Artikelnummer: 2024.05.08.593163 Start- / Endseite: - Identifikator: ZDB: 2766415-6
CoNE: https://pure.mpg.de/cone/journals/resource/2766415-6