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Journal Article

Analysis of global control of Escherichia coli carbohydrate uptake

MPS-Authors
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Kremling,  A.
Systems Biology, Max Planck Institute for Dynamics of Complex Technical Systems, Max Planck Society;

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Bettenbrock,  K.
Systems Biology, Max Planck Institute for Dynamics of Complex Technical Systems, Max Planck Society;

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Gilles,  E. D.
Systems Biology, Max Planck Institute for Dynamics of Complex Technical Systems, Max Planck Society;

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eDoc_329739_2007.pdf
(Publisher version), 396KB

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Citation

Kremling, A., Bettenbrock, K., & Gilles, E. D. (2007). Analysis of global control of Escherichia coli carbohydrate uptake. BMC Systems Biology, 1: 42. doi:10.1186/1752-0509-1-42.


Cite as: https://hdl.handle.net/11858/00-001M-0000-0013-991D-2
Abstract
Global control influences the regulation of many individual subsystems by superimposed regulator proteins. A prominent example is the control of carbohydrate uptake systems by the transcription factor Crp in Escherichia coli. A detailed understanding of the coordination of the control of individual transporters offers possibilities to explore the potential of microorganisms e.g. in biotechnology. An o.d.e. based mathematical model is presented that maps a physiological parameter - the specific growth rate - to the sensor of the signal transduction unit, here a component of the bacterial phosphotransferase system (PTS), namely EIIA^Crr. The model describes the relation between the growth rate and the degree of phosphorylation of EIIA^Crr for a number of carbohydrates by a distinctive response curve, that differentiates between PTS transported carbohydrates and non-PTS carbohydrates. With only a small number of kinetic parameters, the model is able to describe a broad range of experimental steady-state and dynamical conditions. With a minor number of kinetic parameters, the model is able to describe a broad range of experimental steady-state and dynamical conditions.