Discovering Common Sequence Variation in Arabidopsis thaliana

Rätsch, G; Clark, L; Toomajian, C; Ossowski, S; Zeller, G; Shinn, P; Warthman, N; Hu, T; Fu, G; Hinds, D; Cheng, H; Frazer, K; Huson, D; Schölkopf, B; Nordborg , M; Ecker, J; Weigel, D; Schneeberger, K; Bohlen, A

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Meeting Abstract

Discovering Common Sequence Variation in Arabidopsis thaliana

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Schölkopf, B
Department Empirical Inference, Max Planck Institute for Biological Cybernetics, Max Planck Society;

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http://www.iscb.org/cms_addon/conferences/ismb2008/highlights.php
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Citation

Rätsch, G., Clark, L., Toomajian, C., Ossowski, S., Zeller, G., Shinn, P., et al. (2008). Discovering Common Sequence Variation in Arabidopsis thaliana. In 16th Annual International Conference Intelligent Systems for Molecular Biology (ISMB 2008).

Cite as: https://hdl.handle.net/11858/00-001M-0000-0013-C8A3-6

Abstract

In order to characterize natural sequence
variation in 20 strains of Arabidopsis
thaliana, whole-genome resequencing
with high-density oligonucleotide
arrays was performed in collaboration
with Perlegen Sciences Inc. Array
data were analyzed with a combination
of existing model-based (MB) (1)
and novel machine learning (ML) methods.