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Discovering Common Sequence Variation in Arabidopsis thaliana

MPS-Authors
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Rätsch,  G
Friedrich Miescher Laboratory, Max Planck Society;

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Schölkopf,  B
Department Empirical Inference, Max Planck Institute for Biological Cybernetics, Max Planck Society;
Max Planck Institute for Biological Cybernetics, Max Planck Society;

/persons/resource/persons85266

Weigel,  D
Max Planck Institute for Developmental Biology, Max Planck Society;

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Citation

Rätsch, G., Clark, L., Toomajian, C., Ossowski, S., Zeller, G., Shinn, P., et al. (2008). Discovering Common Sequence Variation in Arabidopsis thaliana. In 16th Annual International Conference Intelligent Systems for Molecular Biology (ISMB 2008).


Cite as: http://hdl.handle.net/11858/00-001M-0000-0013-C8A3-6
Abstract
In order to characterize natural sequence variation in 20 strains of Arabidopsis thaliana, whole-genome resequencing with high-density oligonucleotide arrays was performed in collaboration with Perlegen Sciences Inc. Array data were analyzed with a combination of existing model-based (MB) (1) and novel machine learning (ML) methods.