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Structure of the monomeric outer-membrane porin OmpG in the open and closed conformation

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Yildiz,  Oezkan       
Department of Structural Biology, Max Planck Institute of Biophysics, Max Planck Society;

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Vinothkumar,  Kutta Ragunath
Department of Structural Biology, Max Planck Institute of Biophysics, Max Planck Society;

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Goswami,  Panchali
Department of Structural Biology, Max Planck Institute of Biophysics, Max Planck Society;

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Kühlbrandt,  Werner       
Department of Structural Biology, Max Planck Institute of Biophysics, Max Planck Society;

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Citation

Yildiz, O., Vinothkumar, K. R., Goswami, P., & Kühlbrandt, W. (2006). Structure of the monomeric outer-membrane porin OmpG in the open and closed conformation. The EMBO Journal, 25, 3702-3713. doi:10.1038/sj.emboj.7601237.


Cite as: https://hdl.handle.net/11858/00-001M-0000-0024-D989-3
Abstract
OmpG, a monomeric pore-forming protein from Escherichia coli outer membranes, was refolded from inclusion bodies and crystallized in two different conformations. The OmpG channel is a 14-stranded beta-barrel, with short periplasmic turns and seven extracellular loops. Crystals grown at neutral pH show the channel in the open state at 2.3 A resolution. In the 2.7 A structure of crystals grown at pH 5.6, the pore is blocked by loop 6, which folds across the channel. The rearrangement of loop 6 appears to be triggered by a pair of histidine residues, which repel one another at acidic pH, resulting in the breakage of neighbouring H-bonds and a lengthening of loop 6 from 10 to 17 residues. A total of 151 ordered LDAO detergent molecules were found in the 2.3 A structure, mostly on the hydrophobic outer surface of OmpG, mimicking the outer membrane lipid bilayer, with three LDAO molecules in the open pore. In the 2.7 A structure, OmpG binds one OG and one glucose molecule as sugar substrates in the closed pore.