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Journal Article

Meta-analysis of gene–environment-wide association scans accounting for education level identifies additional loci for refractive error

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St Pourcain,  Beate
Language and Genetics Department, MPI for Psycholinguistics, Max Planck Society;
University of Bristol;
Population genetics of human communication, MPI for Psycholinguistics, Max Planck Society;

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Fan_etal_2016.pdf
(Publisher version), 719KB

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Fan_etal_2016sup.pdf
(Supplementary material), 2MB

Citation

Fan, Q., Verhoeven, V. J., Wojciechowski, R., Barathi, V. A., Hysi, P. G., Guggenheim, J. A., et al. (2016). Meta-analysis of gene–environment-wide association scans accounting for education level identifies additional loci for refractive error. Nature Communications, 7: 11008. doi:10.1038/ncomms11008.


Cite as: https://hdl.handle.net/11858/00-001M-0000-002A-42B0-0
Abstract
Myopia is the most common human eye disorder and it results from complex genetic and environmental causes. The rapidly increasing prevalence of myopia poses a major public health challenge. Here, the CREAM consortium performs a joint meta-analysis to test single-nucleotide polymorphism (SNP) main effects and SNP × education interaction effects on refractive error in 40,036 adults from 25 studies of European ancestry and 10,315 adults from 9 studies of Asian ancestry. In European ancestry individuals, we identify six novel loci (FAM150B-ACP1, LINC00340, FBN1, DIS3L-MAP2K1, ARID2-SNAT1 and SLC14A2) associated with refractive error. In Asian populations, three genome-wide significant loci AREG, GABRR1 and PDE10A also exhibit strong interactions with education (P<8.5 × 10−5), whereas the interactions are less evident in Europeans. The discovery of these loci represents an important advance in understanding how gene and environment interactions contribute to the heterogeneity of myopia