English
 
Help Privacy Policy Disclaimer
  Advanced SearchBrowse

Item

ITEM ACTIONSEXPORT

Released

Journal Article

RNA-Seq transcriptome analysis of direction-selective T4/T5 neurons in Drosophila

MPS-Authors
/persons/resource/persons181386

Pankova,  Katarina
Department: Circuits-Computation-Models / Borst, MPI of Neurobiology, Max Planck Society;

/persons/resource/persons38770

Borst,  Alexander
Department: Circuits-Computation-Models / Borst, MPI of Neurobiology, Max Planck Society;

External Resource
No external resources are shared
Fulltext (restricted access)
There are currently no full texts shared for your IP range.
Fulltext (public)

journal.pone.0163986.PDF
(Publisher version), 2MB

Supplementary Material (public)
There is no public supplementary material available
Citation

Pankova, K., & Borst, A. (2016). RNA-Seq transcriptome analysis of direction-selective T4/T5 neurons in Drosophila. PLoS One, 11(9): e0163986. doi:10.1371/journal.pone.0163986.


Cite as: https://hdl.handle.net/11858/00-001M-0000-002C-0A26-A
Abstract
Neuronal computation underlying detection of visual motion has been studied for more than a half-century. In Drosophila, direction-selective T4/T5 neurons show supralinear signal amplification in response to stimuli moving in their preferred direction, in agreement with the prediction made by the Hassenstein-Reichardt detector. Nevertheless, the molecular mechanism explaining how the Hassenstein-Reichardt model is implemented in T4/T5 cells has not been identified yet. In the present study, we utilized cell type-specific transcriptome profiling with RNA-seq to obtain a complete gene expression profile of T4/T5 neurons. We analyzed the expression of genes that affect neuronal computational properties and can underlie the molecular implementation of the core features of the Hassenstein-Reichardt model to the dendrites of T4/T5 neurons. Furthermore, we used the acquired RNA-seq data to examine the neurotransmitter system used by T4/T5 neurons. Surprisingly, we observed co-expression of the cholinergic markers and the vesicular GABA transporter in T4/T5 neurons. We verified the previously undetected expression of vesicular GABA transporter in T4/T5 cells using VGAT-LexA knock-in line. The provided gene expression dataset can serve as a useful source for studying the properties of direction-selective T4/T5 neurons on the molecular level.