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Metatranscriptome of marine bacterioplankton during winter time in the North Sea assessed by total RNA sequencing

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Kopf,  Anna
Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society;

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Kostadinov,  Ivaylo
Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society;

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Quast,  Christian
Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society;

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Glöckner,  Frank Oliver
Microbial Genomics Group, Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society;

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Citation

Kopf, A., Kostadinov, I., Wichels, A., Quast, C., & Glöckner, F. O. (2015). Metatranscriptome of marine bacterioplankton during winter time in the North Sea assessed by total RNA sequencing. Marine Genomics, 19: 1, pp. 45-46.


Cite as: http://hdl.handle.net/21.11116/0000-0001-C48B-5
Abstract
Marine metatranscriptome data was generated as part of a study investigating the bacterioplankton communities towards the end of a diatom-dominated spring phytoplankton bloom. This genomic resource article reports a metatranscriptomic dataset from amidst the winter time prior to the occurrence of the spring diatom bloom. Up to 58% of all sequences could be assigned to predicted genes. Taxonomic analysis based on expressed 16S ribosomal RNA genes identified Alphaproteobacteria and Gammaproteobacteria as the most active community members.