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FISH shows that Desulfdtomaculum spp. are the dominating sulfate-reducing bacteria in a pristine aquifer

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Detmers,  J.
Department of Microbiology, Max Planck Institute for Marine Microbiology, Max Planck Society;

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Knittel,  K.
Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society;

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Kuever,  J.
Department of Microbiology, Max Planck Institute for Marine Microbiology, Max Planck Society;

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Citation

Detmers, J., Strauss, H., Schulte, U., Bergmann, A., Knittel, K., & Kuever, J. (2004). FISH shows that Desulfdtomaculum spp. are the dominating sulfate-reducing bacteria in a pristine aquifer. Microbial Ecology, 47(3), 236-242.


Cite as: https://hdl.handle.net/21.11116/0000-0001-D15D-B
Abstract
The hydrochemistry and the microbial diversity of a pristine aquifer system near Garzweiler, Germany, were characterized. Hydrogeochemical and isotopic data indicate a recent activity of sulfate-reducing bacteria in the Tertiary marine sands. The community structure in the aquifer was studied by fluorescence in situ hybridization (FISH). Up to 7.3 × 105 cells/mL were detected by DAPI-staining. Bacteria (identified by the probe EUB338) were dominant, representing 51.9% of the total cell number (DAPI). Another 25.7% of total cell were affiliated with the domain Archaea as identified by the probe ARCH915. Within the domain Bacteria, the β-Proteobacteria were most abundant (21.0% of total cell counts). Using genus-specific probes for sulfate-reducing bacteria (SRB), 2.5% of the total cells were identified as members of the genus Desulfotomaculum. This reflects the predominant role these microorganisms have been found to play in sulfate-reducing zones of aquifers at other sites. Previously, all SRB cultured from this site were from the spore-forming genera Desulfotomaculum and Desulfosporosinus.