Visualization of image data from cells to organisms

Walter, Thomas; Shattuck, David W; Baldock, Richard; Bastin, Mark E; Carpenter, Anne E; Duce, Suzanna; Ellenberg, Jan; Fraser, Adam; Hamilton, Nicholas; Pieper, Steve; Ragan, Mark A; Schneider, Jurgen E; Tomancák, Pavel; Hériché, Jean-Karim

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Visualization of image data from cells to organisms

MPS-Authors

Walter, Thomas
Max Planck Society;

Shattuck, David W
Max Planck Society;

Baldock, Richard
Max Planck Society;

Bastin, Mark E
Max Planck Society;

Carpenter, Anne E
Max Planck Society;

Duce, Suzanna
Max Planck Society;

Fraser, Adam
Max Planck Society;

Hamilton, Nicholas
Max Planck Society;

Pieper, Steve
Max Planck Society;

Ragan, Mark A
Max Planck Society;

Schneider, Jurgen E
Max Planck Society;

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Tomancák, Pavel
Max Planck Institute of Molecular Cell Biology and Genetics, Max Planck Society;

Hériché, Jean-Karim
Max Planck Society;

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Citation

Walter, T., Shattuck, D. W., Baldock, R., Bastin, M. E., Carpenter, A. E., Duce, S., et al. (2010). Visualization of image data from cells to organisms. Nature Methods, 7(3s), 26-41.

Cite as: https://hdl.handle.net/21.11116/0000-0001-0C6D-9

Abstract

Advances in imaging techniques and high-throughput technologies are providing scientists with unprecedented possibilities to visualize internal structures of cells, organs and organisms and to collect systematic image data characterizing genes and proteins on a large scale. To make the best use of these increasingly complex and large image data resources, the scientific community must be provided with methods to query, analyze and crosslink these resources to give an intuitive visual representation of the data. This review gives an overview of existing methods and tools for this purpose and highlights some of their limitations and challenges.