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Isoprenyl diphosphate synthases: the chain length determining step in terpene biosynthesis

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Schmidt,  Axel
Department of Biochemistry, Prof. J. Gershenzon, MPI for Chemical Ecology, Max Planck Society;

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Citation

Nagel, R., Schmidt, A., & Peters, R. J. (2019). Isoprenyl diphosphate synthases: the chain length determining step in terpene biosynthesis. Planta, 249(1), 9-20. doi:10.1007/s00425-018-3052-1.


Cite as: https://hdl.handle.net/21.11116/0000-0002-9226-E
Abstract
Main conclusion This review summarizes the recent developments in the study of isoprenyl diphosphate synthases
with an emphasis on analytical techniques, product length determination, and the physiological consequences of
manipulating expression in planta.
The highly diverse structures of all terpenes are synthesized from the five carbon precursors dimethylallyl diphosphate and a
varying number of isopentenyl diphosphate units through 1’-4 alkylation reactions. These elongation reactions are catalyzed
by isoprenyl diphosphate synthases (IDS). IDS are classified depending on the configuration of the ensuing double bond
as trans- and cis-IDS. In addition, IDS are further stratified by the length of their prenyl diphosphate product. This review
discusses analytical techniques for the determination of product length and the factors that control product length, with an
emphasis on alternative mechanisms. With recent advances in analytics, multiple IDS of Arabidopsis thaliana have been
recently reinvestigated and demonstrated to yield products of different lengths than originally reported, which is summarized
here. As IDS dictate prenyl diphosphate length and thereby which class of terpenes is ultimately produced, another focus of
this review is the impact that altering IDS expression has on terpenoid natural product accumulation. Finally, recent findings
regarding the ability of a few IDS to not catalyze 1’-4 alkylation reactions, but instead produce irregular products, with
unusual connectivity, or act as terpene synthases, are also discussed.