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Big data in nanoscale connectomicx, and the greed for training labels

MPS-Authors

Motta,  A.
Connectomics Department, Max Planck Institute for Brain Research, Max Planck Society;

Schurr,  M.
Connectomics Department, Max Planck Institute for Brain Research, Max Planck Society;

Staffler,  B.
Connectomics Department, Max Planck Institute for Brain Research, Max Planck Society;

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Helmstaedter,  Moritz
Connectomics Department, Max Planck Institute for Brain Research, Max Planck Society;

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Citation

Motta, A., Schurr, M., Staffler, B., & Helmstaedter, M. (2019). Big data in nanoscale connectomicx, and the greed for training labels. Current Opinion in Neurobiology, (55), 180-187. doi:10.1016/j.conb.2019.03.012.


Cite as: https://hdl.handle.net/21.11116/0000-0006-06DE-A
Abstract
The neurosciences have developed methods that outpace most other biomedical fields in terms of acquired bytes. We review how the information content and analysis challenge of such data indicates that electron microscopy (EM)-based connectomics is an especially hard problem. Here, as in many other current machine learing applications, the need for excessive amounts of labelled data while utilizing only a small fraction of available raw image data for algorithm training illustrates the still fundamental gap between artificial and biological intelligence. Substantial improvements of label and energy efficiency in machine learning may be required to address the formidable challenge of acquiring the nanoscale connectome of a human brain.