Deutsch
 
Hilfe Datenschutzhinweis Impressum
  DetailsucheBrowse

Datensatz

DATENSATZ AKTIONENEXPORT

Freigegeben

Zeitschriftenartikel

A flexible Bayesian framework for unbiased estimation of timescales

MPG-Autoren
/persons/resource/persons215938

Zeraati,  R
Department of Computational Neuroscience, Max Planck Institute for Biological Cybernetics, Max Planck Society;

/persons/resource/persons173580

Levina,  A
Department of Computational Neuroscience, Max Planck Institute for Biological Cybernetics, Max Planck Society;

Externe Ressourcen
Volltexte (beschränkter Zugriff)
Für Ihren IP-Bereich sind aktuell keine Volltexte freigegeben.
Volltexte (frei zugänglich)
Es sind keine frei zugänglichen Volltexte in PuRe verfügbar
Ergänzendes Material (frei zugänglich)
Es sind keine frei zugänglichen Ergänzenden Materialien verfügbar
Zitation

Zeraati, R., Engel, T., & Levina, A. (2022). A flexible Bayesian framework for unbiased estimation of timescales. Nature Computational Science, 2(3), 193-204. doi:10.1038/s43588-022-00214-3.


Zitierlink: https://hdl.handle.net/21.11116/0000-0008-94AE-D
Zusammenfassung
Timescales characterize the pace of change for many dynamic processes in nature. They are usually estimated by fitting the exponential decay of data autocorrelation in the time or frequency domain. Here we show that this standard procedure often fails to recover the correct timescales due to a statistical bias arising from the finite sample size. We develop an alternative approach to estimate timescales by fitting the sample autocorrelation or power spectrum with a generative model based on a mixture of Ornstein–Uhlenbeck processes using adaptive approximate Bayesian computations. Our method accounts for finite sample size and noise in data and returns a posterior distribution of timescales that quantifies the estimation uncertainty and can be used for model selection. We demonstrate the accuracy of our method on synthetic data and illustrate its application to recordings from the primate cortex. We provide a customizable Python package that implements our framework via different generative models suitable for diverse applications.