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Translation error clusters induced by aminoglycoside antibiotics

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Wohlgemuth,  I.
Department of Physical Biochemistry, MPI for biophysical chemistry, Max Planck Society;

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Garofalo,  R.
Department of Physical Biochemistry, MPI for Biophysical Chemistry, Max Planck Society;

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Samatova,  E. N.       
Department of Physical Biochemistry, MPI for Biophysical Chemistry, Max Planck Society;

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Günenç,  A. N.
Department of Physical Biochemistry, MPI for Biophysical Chemistry, Max Planck Society;

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Lenz,  C.
Research Group of Bioanalytical Mass Spectrometry, MPI for Biophysical Chemistry, Max Planck Society;

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Urlaub,  H.
Research Group of Bioanalytical Mass Spectrometry, MPI for biophysical chemistry, Max Planck Society;

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Rodnina,  M. V.
Department of Physical Biochemistry, MPI for biophysical chemistry, Max Planck Society;

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Citation

Wohlgemuth, I., Garofalo, R., Samatova, E. N., Günenç, A. N., Lenz, C., Urlaub, H., et al. (2021). Translation error clusters induced by aminoglycoside antibiotics. Nature Communications, 12: 1830. doi:10.1038/s41467-021-21942-6.


Cite as: https://hdl.handle.net/21.11116/0000-0009-5724-D
Abstract
Aminoglycoside antibiotics target the ribosome and induce mistranslation, yet which translation errors induce bacterial cell death is unclear. The analysis of cellular proteins by quantitative mass spectrometry shows that bactericidal aminoglycosides induce not only single translation errors, but also clusters of errors in full-length proteins in vivo with as many as four amino acid substitutions in a row. The downstream errors in a cluster are up to 10,000-fold more frequent than the first error and independent of the intracellular aminoglycoside concentration. The prevalence, length, and composition of error clusters depends not only on the misreading propensity of a given aminoglycoside, but also on its ability to inhibit ribosome translocation along the mRNA. Error clusters constitute a distinct class of misreading events in vivo that may provide the predominant source of proteotoxic stress at low aminoglycoside concentration, which is particularly important for the autocatalytic uptake of the drugs.