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Identification of Ppar γ-modulated miRNA hubs that target the fibrotic tumor microenvironment

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Winkler,  I
IMPRS From Molecules to Organisms, Max Planck Institute for Developmental Biology, Max Planck Society;

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Bitter,  C
IMPRS From Molecules to Organisms, Max Planck Institute for Developmental Biology, Max Planck Society;

/persons/resource/persons272543

Winkler,  S
IMPRS From Molecules to Organisms, Max Planck Institute for Developmental Biology, Max Planck Society;

/persons/resource/persons273004

Thavamani,  A
IMPRS From Molecules to Organisms, Max Planck Institute for Developmental Biology, Max Planck Society;

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Kohlbacher,  O
IMPRS From Molecules to Organisms, Max Planck Institute for Developmental Biology, Max Planck Society;
Research Group Biomolecular Interactions, Max Planck Institute for Developmental Biology, Max Planck Society;

/persons/resource/persons273007

Nordheim,  A
IMPRS From Molecules to Organisms, Max Planck Institute for Developmental Biology, Max Planck Society;

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Citation

Winkler, I., Bitter, C., Winkler, S., Weichenhan, D., Thavamani, A., Hengstler, J., et al. (2020). Identification of Ppar γ-modulated miRNA hubs that target the fibrotic tumor microenvironment. Proceedings of the National Academy of Sciences of the United States of America, 117(1), 454-463. doi:10.1073/pnas.1909145117.


Cite as: https://hdl.handle.net/21.11116/0000-000A-5E88-4
Abstract
Liver fibrosis interferes with normal liver function and facilitates hepatocellular carcinoma (HCC) development, representing a major threat to human health. Here, we present a comprehensive perspective of microRNA (miRNA) function on targeting the fibrotic microenvironment. Starting from a murine HCC model, we identify a miRNA network composed of 8 miRNA hubs and 54 target genes. We show that let-7, miR-30, miR-29c, miR-335, and miR-338 (collectively termed antifibrotic microRNAs [AF-miRNAs]) down-regulate key structural, signaling, and remodeling components of the extracellular matrix. During fibrogenic transition, these miRNAs are transcriptionally regulated by the transcription factor Pparγ and thus we identify a role of Pparγ as regulator of a functionally related class of AF-miRNAs. The miRNA network is active in human HCC, breast, and lung carcinomas, as well as in 2 independent mouse liver fibrosis models. Therefore, we identify a miRNA:mRNA network that contributes to formation of fibrosis in tumorous and nontumorous organs of mice and humans.