Online Quantitative Transcriptome Analysis

Bohnert, R; Behr, J; Kahles, A; Jean, G; Rätsch, G

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Online Quantitative Transcriptome Analysis

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Bohnert, R
Rätsch Group, Friedrich Miescher Laboratory, Max Planck Society;

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Behr, J
Rätsch Group, Friedrich Miescher Laboratory, Max Planck Society;

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Kahles, A
Rätsch Group, Friedrich Miescher Laboratory, Max Planck Society;

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Jean, G
Rätsch Group, Friedrich Miescher Laboratory, Max Planck Society;

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Rätsch, G
Rätsch Group, Friedrich Miescher Laboratory, Max Planck Society;

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https://www.iscb.org/uploaded/css/68/18880.pdf
(Abstract)

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Citation

Bohnert, R., Behr, J., Kahles, A., Jean, G., & Rätsch, G. (2010). Online Quantitative Transcriptome Analysis. Poster presented at 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB 2010), Boston, MA, USA.

Cite as: https://hdl.handle.net/21.11116/0000-000A-DA48-0

Abstract

The current revolution in sequencing technologies allows us to obtain a much more detailed picture of transcriptomes via RNA-Sequencing. We present the first integrative online platform for quantitatively analyzing RNA-Seq experiments. It is based on the Galaxy-framework and provides tools for read mapping, transcript reconstruction and quantitation.