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Journal Article

AppaDB: an AcedB database for the nematode satellite organism Pristionchus pacificus

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Srinivasan,  J
Department Integrative Evolutionary Biology, Max Planck Institute for Developmental Biology, Max Planck Society;

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Otto,  GW
Department Genetics, Max Planck Institute for Developmental Biology, Max Planck Society;

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Kahlow,  U
Department Protein Evolution, Max Planck Institute for Developmental Biology, Max Planck Society;

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Geisler,  R
Department Genetics, Max Planck Institute for Developmental Biology, Max Planck Society;

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Sommer,  RJ       
Department Integrative Evolutionary Biology, Max Planck Institute for Developmental Biology, Max Planck Society;

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Citation

Srinivasan, J., Otto, G., Kahlow, U., Geisler, R., & Sommer, R. (2004). AppaDB: an AcedB database for the nematode satellite organism Pristionchus pacificus. Nucleic Acids Research (London), 32(Database issue), D421-D422. doi:10.1093/nar/gkh057.


Cite as: https://hdl.handle.net/21.11116/0000-000B-5D85-7
Abstract
Pristionchus pacificus is a free-living nematode of the Diplogastridae family and was recently developed as a satellite system in evolutionary developmental biology. AppaDB, a P.pacificus database, was created (http://appadb.eb.tuebingen. mpg.de) to integrate the genomic data of P.pacificus, comprising the physical map, genetic linkage map, EST and BAC end sequence and hybridization data. This developing database serves as a repository to search and find any information regarding physical contigs or genetic markers required for mapping of mutants. Additionally, it provides a platform for the Caenorhabditis elegans community to compare nematode genetic data in an evolutionary perspective.