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Journal Article

Evolution of genome fragility enables microbial division of labor

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van Dijk,  Bram
Department Microbial Population Biology, Max Planck Institute for Evolutionary Biology, Max Planck Society;

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Citation

Colizzi, E. S., van Dijk, B., Merks, R. M. H., Rozen, D. E., & Vroomans, R. M. A. (2023). Evolution of genome fragility enables microbial division of labor. Molecular Systems Biology, 19(3): e11353. doi:10.15252/msb.202211353.


Cite as: https://hdl.handle.net/21.11116/0000-0009-FBF0-D
Abstract
Division of labor can evolve when social groups benefit from the functional specialization of its members. Recently, a novel means of coordinating the division of labor was found in the antibiotic-producing bacterium Streptomyces coelicolor, where specialized cells are generated through large-scale genomic re-organization. We investigate how the evolution of a genome architecture enables such mutation-driven division of labor, using a multiscale computational model of bacterial evolution. In this model, bacterial behavior—antibiotic production or replication—is determined by the structure and composition of their genome, which encodes antibiotics, growth-promoting genes, and fragile genomic loci that can induce chromosomal deletions. We find that a genomic organization evolves, which partitions growth-promoting genes and antibiotic-coding genes into distinct parts of the genome, separated by fragile genomic loci. Mutations caused by these fragile sites mostly delete growth-promoting genes, generating sterile, and antibiotic-producing mutants from weakly-producing progenitors, in agreement with experimental observations. This division of labor enhances the competition between colonies by promoting antibiotic diversity. These results show that genomic organization can co-evolve with genomic instabilities to enable reproductive division of labor.