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  Dbf4-dependent kinase promotes cell cycle controlled resection of DNA double-strand breaks and repair by homologous recombination

Galanti, L., Peritore, M., Gnugge, R., Cannavo, E., Heipke, J., Palumbieri, M. D., et al. (2024). Dbf4-dependent kinase promotes cell cycle controlled resection of DNA double-strand breaks and repair by homologous recombination. Nature Communications, 15(1): 2890. doi:10.1038/s41467-024-46951-z.

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 Creators:
Galanti, Lorenzo1, Author           
Peritore, Martina1, Author           
Gnugge, Robert2, Author
Cannavo, Elda2, Author
Heipke, Johannes1, Author           
Palumbieri, Maria Dilia2, Author
Steigenberger, Barbara3, Author           
Symington, Lorraine S.2, Author
Cejka, Petr2, Author
Pfander, Boris1, Author           
Affiliations:
1Pfander, Boris / DNA Replication and Genome Integrity, Max Planck Institute of Biochemistry, Max Planck Society, ou_1565165              
2external, ou_persistent22              
3Scientific Service Groups, Max Planck Institute of Biochemistry, Max Planck Society, ou_1565170              

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Free keywords: PROTEIN PHOSPHATASE 1; END-RESECTION; S-PHASE; CHECKPOINT ACTIVATION; PHOSPHORYLATION SITES; FILAMENT FORMATION; NUCLEASE COMPLEX; MRE11 NUCLEASE; REPLICATION; MECHANISMScience & Technology - Other Topics;
 Abstract: DNA double-strand breaks (DSBs) can be repaired by several pathways. In eukaryotes, DSB repair pathway choice occurs at the level of DNA end resection and is controlled by the cell cycle. Upon cell cycle-dependent activation, cyclin-dependent kinases (CDKs) phosphorylate resection proteins and thereby stimulate end resection and repair by homologous recombination (HR). However, inability of CDK phospho-mimetic mutants to bypass this cell cycle regulation, suggests that additional cell cycle regulators may be important. Here, we identify Dbf4-dependent kinase (DDK) as a second major cell cycle regulator of DNA end resection. Using inducible genetic and chemical inhibition of DDK in budding yeast and human cells, we show that end resection and HR require activation by DDK. Mechanistically, DDK phosphorylates at least two resection nucleases in budding yeast: the Mre11 activator Sae2, which promotes resection initiation, as well as the Dna2 nuclease, which promotes resection elongation. Notably, synthetic activation of DDK allows limited resection and HR in G1 cells, suggesting that DDK is a key component of DSB repair pathway selection.
The repair of DNA double strand breaks is strictly controlled during the cell cycle by the CDK kinase. Here the authors identify the DDK kinase as a second major regulator for this cell cycle regulation and elucidate its functional targets.

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Language(s): eng - English
 Dates: 2024-04-03
 Publication Status: Published online
 Pages: 19
 Publishing info: -
 Table of Contents: -
 Rev. Type: Peer
 Degree: -

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Title: Nature Communications
  Abbreviation : Nat. Commun.
Source Genre: Journal
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Publ. Info: London : Nature Publishing Group
Pages: - Volume / Issue: 15 (1) Sequence Number: 2890 Start / End Page: - Identifier: ISSN: 2041-1723
CoNE: https://pure.mpg.de/cone/journals/resource/2041-1723