Researcher Portfolio

 
   

Ruaud, Albane

Department Microbiome Science, Max Planck Institute for Biology Tübingen, Max Planck Society, Department Microbiome Science, Max Planck Institute for Developmental Biology, Max Planck Society  

 

Researcher Profile

 
Position: Department Microbiome Science, Max Planck Institute for Biology Tübingen, Max Planck Society
Position: Department Microbiome Science, Max Planck Institute for Developmental Biology, Max Planck Society
Additional IDs: MPIB: aruaud
ORCID: https://orcid.org/0000-0001-5920-1710
Researcher ID: https://pure.mpg.de/cone/persons/resource/persons272254

External references

 

Publications

 
 
 : Fitzstevens, L., Liu, X., Ruaud, A., Schmidt, V., Mbong Ngwese, M., Youngblut, N., Rauch, J., Suzuki, T., Ha, N., Arzamasov, A., Rodionov, D., Pfister, N., Thams, N., Adegbite, B., Zinsou, J., Esen, M., Velavan, T., Adegnika, A., Song, L., Kremsner, P., Ostermann, A., Tyakht, A., & Ley, R. (2024). Bifidobacteria compensate for genotype in lactose tolerance. Poster presented at 75th Mosbacher Kolloquium "The Microbiome - from Understanding to Modulation", Mosbach, Germany. [PubMan] : Fitzstevens, L., Liu, X., Ruaud, A., Schmidt, V., Mbong, M., Rauch, J., Nguyen Thu, H., Adegbite, B., Zinsou, J., Esen, M., Velavan, T., Adegnika, A., Song, L., Kremsner, P., Youngblut, N., Tyakht, A., & Ley, R. (2023). Bifidobacteria confer microbiome-acquired lactose tolerance in genetically lactase-non persistent humansrts. Poster presented at 3rd International Conference Controlling Microbes to Fight Infections (CMFI 2023), Tübingen, Germany. [PubMan] : Ruaud, A., Pfister, N., Ley, R., & Youngblut, N. (2023). Enhancing the application of machine learning models to microbiome data with endoR. Poster presented at Cell Symposia: Infection Biology in the Age of the Microbiome, Paris, France. [PubMan] : Ruaud, A., Pfister, N., Ley, R., & Youngblut, N. (2022). Interpreting tree ensemble machine learning models with endoR. PLoS Computational Biology, 18(12): e1010714. doi:10.1371/journal.pcbi.1010714. [PubMan] : Welter, D., Ruaud, A., Henseler, Z., De Jong, H., van Coeverden de Groot, P., Michaux, J., Gormezano, L., Waters, J., Youngblut, N., & Ley, R. (in press). Free-living psychrophilic bacteria of the genus Psychrobacter are descendants of pathobionts. mSystems. doi:10.1101/2020.10.23.352302. [PubMan] : Ruaud, A., Pfister, N., Ley, R., & Youngblut, N. (2021). Interpretation of Tree Ensemble Machine Learning Models with EndoR. Poster presented at World Microbe Forum 2021. [PubMan] : Welter, D., Ruaud, A., Henseler, Z., De Jong, H., van Coeverden de Groot, P., Michaux, J., Gormezano, L., Waters, J., Youngblut, N., & Ley, R. (2021). Free-Living, Psychrotrophic Bacteria of the Genus Psychrobacter Are Descendants of Pathobionts. mSystems, 6(2): e00258-21. doi:10.1128/mSystems.00258-21. [PubMan] : Faktorová, D., Nisbet, R., Fernández Robledo, J., Casacuberta, E., Sudek, L., Allen, A., Ares, M., Balestreri, C., Barbrook, A., Beardslee, P., Bender, S., Booth, D., Bouget, Y.-F., Bowler, C., Breglia, S., Brownlee, C., Burger, G., Cerutti, H., Cesaroni, R., Chiurillo, M., Clemente, T., Coles, D., Collier, J., Cooney, E., Coyne, K., Docampo, R., Dupont, C., Edgcomb, V., Einarsson, E., Elustondo, P., Federici, F., Freire-Beneitez, V., Freyria, N., Fukuda, K., García, P., Girguis, P., Gomaa, R., Gornik, S., Guo, J., Hampl, V., Hanawa, Y., Haro-Contreras, E., Hehenberger, E., Highfield, A., Hirakawa, Y., Hopes, A., Howe, C., Hu, I., Ibañez, J., Irwin, N., Ishii, Y., Janowicz, N., Jones, A., Kachele, A., Fujimura-Kamada, K., Kaur, B., Kaye, J., Kazana, A., Keeling, P., King, N., Klobutcher, L., Lander, N., Lassadi, I., Li, Z., Lin, S., Lozano, J.-C., Luan, F., Maruyama, S., Matute, T., Miceli, C., Minagawa, J., Moosburner, M., Najle, S., Nanjappa, D., Nimmo, I., Noble, L., Novák Vanclová, A., Nowacki, M., Nuñez, I., Pain, A., Piersanti, A., Pucciarelli, S., Pyrih, J., Rest, J., Rius, M., Robertson, D., Ruaud, A., Ruiz-Trillo, I., Sigg, M., Silver, P., Slamovits, C., Smith, G., Sprecher, B., Stern, R., Swart, E., Tsaousis, A., Tsypin, L., Turkewitz, A., Turnšek, J., Valach, M., Vergé, V., von Dassow, P., von der Haar, T., Waller, R., Wang, L., Wen, X., Wheeler, G., Woods, A., Zhang, H., Mock, T., Worden, A., & Lukeš, J. (2020). Publisher Correction: Genetic tool development in marine protists: emerging model organisms for experimental cell biology. Nature Methods, 17(5): 551. doi:10.1038/s41592-020-0828-6. [PubMan] : Faktorová, D., Nisbet, R., Fernández Robledo, J., Casacuberta, E., Sudek, L., Allen, A., Ares, M., Balestreri, C., Barbrook, A., Beardslee, P., Bender, S., Booth, D., Bouget, Y.-F., Bowler, C., Breglia, S., Brownlee, C., Burger, G., Cerutti, H., Cesaroni, R., Chiurillo, M., Clemente, T., Coles, D., Collier, J., Cooney, E., Coyne, K., Docampo, R., Dupont, C., Edgcomb, V., Einarsson, E., Elustondo, P., Federici, F., Freire-Beneitez, V., Freyria, N., Fukuda, K., García, P., Girguis, P., Gomaa, R., Gornik, S., Guo, J., Hampl, V., Hanawa, Y., Haro-Contreras, E., Hehenberger, E., Highfield, A., Hirakawa, Y., Hopes, A., Howe, C., Hu, I., Ibañez, J., Irwin, N., Ishii, Y., Janowicz, N., Jones, A., Kachele, A., Fujimura-Kamada, K., Kaur, B., Kaye, J., Kazana, A., Keeling, P., King, N., Klobutcher, L., Lander, N., Lassadi, I., Li, Z., Lin, S., Lozano, J.-C., Luan, F., Maruyama, S., Matute, T., Miceli, C., Minagawa, J., Moosburner, M., Najle, S., Nanjappa, D., Nimmo, I., Noble, L., Novák Vanclová, A., Nowacki, M., Nuñez, I., Pain, A., Piersanti, A., Pucciarelli, S., Pyrih, J., Rest, J., Rius, M., Robertson, D., Ruaud, A., Ruiz-Trillo, I., Sigg, M., Silver, P., Slamovits, C., Smith, G., Sprecher, B., Stern, R., Swart, E., Tsaousis, A., Tsypin, L., Turkewitz, A., Turnšek, J., Valach, M., Vergé, V., von Dassow, P., von der Haar, T., Waller, R., Wang, L., Wen, X., Wheeler, G., Woods, A., Zhang, H., Mock, T., Worden, A., & Lukeš, J. (2020). Genetic tool development in marine protists: emerging model organisms for experimental cell biology. Nature Methods, 17(5), 481-494. doi:10.1038/s41592-020-0796-x. [PubMan] : Ruaud, A., Esquivel-Elizondo, S., de la Cuesta-Zuluaga, J., Waters, J., Angenent, L., Youngblut, N., & Ley, R. (2020). Syntrophy via Interspecies H2 Transfer between Christensenella and Methanobrevibacter Underlies Their Global Cooccurrence in the Human Gut. mBio, 11(1): e03235-19. doi:10.1128/mBio.03235-19. [PubMan] : Poole, A., Goodrich, J., Youngblut, N., Luque, G., Ruaud, A., Sutter, J., Waters, J., Shi, Q., El-Hadidi, M., Johnson, L., Bar, H., Huson, D., Booth, J., & Ley, R. (2019). Human Salivary Amylase Gene Copy Number Impacts Oral and Gut Microbiomes. Cell Host & Microbe, 25(4), 553-564. doi:10.1016/j.chom.2019.03.001. [PubMan]