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  De novo sequencing of two novel peptides homologous to calcitonin-like peptides, from skin secretion of the Chinese Frog, Odorrana schmackeri

Evaristo, G. P., Pinkse, M. W., Chen, T., Wang, L., Mohammed, S., Heck, A. J., et al. (2015). De novo sequencing of two novel peptides homologous to calcitonin-like peptides, from skin secretion of the Chinese Frog, Odorrana schmackeri. EuPA Open Proteomics, 8, 157-166. doi:10.1016/j.euprot.2015.07.008.

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 Urheber:
Evaristo, Geisa P.C., Autor
Pinkse, Martijn W.H., Autor
Chen, Tianbao, Autor
Wang, Lei, Autor
Mohammed, Shabaz, Autor
Heck, Albert J.R., Autor
Mathes, Isabella1, Autor           
Lottspeich, Friedrich1, Autor           
Shawb, Chris, Autor
Albare, Juan Pablo, Autor
Verhaerta, Peter D.E.M., Autor
Affiliations:
1Lottspeich, Friedrich / Protein Analysis, Max Planck Institute of Biochemistry, Max Planck Society, ou_1565158              

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Schlagwörter: Calcitonin-like peptides, CGRP-like peptides, Adrenomedullin-like peptides, Frog skin, LC MSn, De novo sequencing
 Zusammenfassung: An MS/MS based analytical strategy was followed to solve the complete sequence of two new peptides from frog (Odorrana schmackeri) skin secretion. This involved reduction and alkylation with two different alkylating agents followed by high resolution tandem mass spectrometry. De novo sequencing was achieved by complementary CID and ETD fragmentations of full-length peptides and of selected tryptic fragments. Heavy and light isotope dimethyl labeling assisted with annotation of sequence ion series. The identified primary structures are GCD[I/L]STCATHN[I/L]VNE[I/L]NKFDKSKPSSGGVGPESP-NH2 and SCNLSTCATHNLVNELNKFDKSKPSSGGVGPESF-NH2, i.e. two carboxyamidated 34 residue peptides with an aminoterminal intramolecular ring structure formed by a disulfide bridge between Cys2 and Cys7. Edman degradation analysis of the second peptide positively confirmed the exact sequence, resolving I/L discrimi5nations. Both peptide sequences are novel and share homology with calcitonin, calcitonin gene related peptide (CGRP) and adrenomedullin from other vertebrates. Detailed sequence analysis as well as the 34 residue length of both O. schmackeri peptides, suggest they do not fully qualify as either calcitonins (32 residues) or CGRPs (37 amino acids) and may justify their classification in a novel peptide family within the calcitonin gene related peptide superfamily. Smooth muscle contractility assays with synthetic replicas of the S–S linked peptides on rat tail artery, uterus, bladder and ileum did not reveal myotropic activity.

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Sprache(n): eng - English
 Datum: 2015-07-06
 Publikationsstatus: Online veröffentlicht
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 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: DOI: 10.1016/j.euprot.2015.07.008
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Titel: EuPA Open Proteomics
Genre der Quelle: Zeitschrift
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Ort, Verlag, Ausgabe: Amsterdam : Elsevier
Seiten: - Band / Heft: 8 Artikelnummer: - Start- / Endseite: 157 - 166 Identifikator: ISSN: 2212-9685