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  Model Construction and Analysis of Respiration in Halobacterium salinarum

Talaue, C. O., del Rosario, R., Pfeiffer, F., Mendoza, E. R., & Oesterhelt, D. (2016). Model Construction and Analysis of Respiration in Halobacterium salinarum. PLOS ONE, 11(3): e0151839. doi:10.1371/journal.pone.0151839.

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Talaue, Cherryl O.1, Autor
del Rosario, Ricardo2, Autor           
Pfeiffer, Friedhelm2, Autor           
Mendoza, Eduardo R.2, Autor           
Oesterhelt, Dieter2, Autor           
Affiliations:
1external, ou_persistent22              
2Oesterhelt, Dieter / Membrane Biochemistry, Max Planck Institute of Biochemistry, Max Planck Society, ou_1565164              

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Schlagwörter: INTRACELLULAR ADENOSINE-TRIPHOSPHATE; ELECTROCHEMICAL PROTON GRADIENT; ELECTRON-TRANSPORT CHAIN; CELL-MEMBRANE; STRAIN NRC-1; HALOBIUM; BIOENERGETICS; PHOTOPHOSPHORYLATION; PH
 Zusammenfassung: The archaeon Halobacterium salinarum can produce energy using three different processes, namely photosynthesis, oxidative phosphorylation and fermentation of arginine, and is thus a model organism in bioenergetics. Compared to its bacteriorhodopsin-driven photosynthesis, less attention has been devoted to modeling its respiratory pathway. We created a system of ordinary differential equations that models its oxidative phosphorylation. The model consists of the electron transport chain, the ATP synthase, the potassium uniport and the sodium-proton antiport. By fitting the model parameters to experimental data, we show that the model can explain data on proton motive force generation, ATP production, and the charge balancing of ions between the sodium-proton antiporter and the potassium uniport. We performed sensitivity analysis of the model parameters to determine how the model will respond to perturbations in parameter values. The model and the parameters we derived provide a resource that can be used for analytical studies of the bioenergetics of H. salinarum.

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Sprache(n): eng - English
 Datum: 2016
 Publikationsstatus: Online veröffentlicht
 Seiten: 22
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: ISI: 000372708000050
DOI: 10.1371/journal.pone.0151839
 Art des Abschluß: -

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Titel: PLOS ONE
Genre der Quelle: Zeitschrift
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Ort, Verlag, Ausgabe: 1160 BATTERY STREET, STE 100, SAN FRANCISCO, CA 94111 USA : PUBLIC LIBRARY SCIENCE
Seiten: - Band / Heft: 11 (3) Artikelnummer: e0151839 Start- / Endseite: - Identifikator: ISSN: 1932-6203